MXO02761.5prime Sequence
771 bp (719 high quality bases) assembled on 2007-04-13
> MXO02761.5prime
CAGTCGACATGATGCAGCCGACACTAGTGATTTTGGGTCTGATCGGATTG
ACGGCGGTGGGCATGTGCCACGCCCAGGGACGCATCATGGGAGGGGAGGA
CGCGGACGCCACAGCCACGACCTTCACCGCCTCCTTGCGGGTGGACAATG
CCCATGTGTGCGGCGGTAGCATTCTCTCCCAGACCAAAATCCTGACCACC
GCCCACTGTGTGCATCGCGATGGAAAGCTAATCGATGCCAGTCGCCTGGC
GTGCCGCGTGGGCAGTACCAACCAGTATGCTGGTGGCAAGATTGTCAACG
TGGAATCGGTTGCAGTGCATCCGGACTACTATAATCTGAACAACAACCTG
GCCGTGATCACGCTGAGCTCTGAGCTGACCTACACCGATCGGATCACTGC
CATCCCGCTGGTCGCCAGCGGAGAGGCACTGCCCGCCGAGGGATCGGAGG
TGATCGTGGCCGGCTGGGGACGCACCAGCGACGGCACCAACTCCTACAAG
ATCCGTCAGATATCGCTAAAGGTGGCCCCGGAGGCGACCTGCCTGGATGC
GTACAGCGATCACGACGAGCAGAGCTTCTGCCTCGCCCACGAGCTGAAGG
AGGGCACCTGCCACGGAGACGGAGGCGGTGGTGCCATCTATGGCAACACG
TTGATCGGGCTGACCAACTTTGTGGTGGGCGCCTGTGGCTCCCGCTATCC
GGATGTCTTTGTCCGACTCTCCAGCTACGCGGATTGGATCCAGGAGCAGA
TCGCCGCAAGCTTTCTAGACC
MXO02761.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:26:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9675-PA | 750 | CG9675-RA | 1..747 | 9..755 | 3710 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spheroide-RA | 1263 | CG9675-RA | 76..822 | 9..755 | 3720 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16700887..16701412 | 755..230 | 2630 | 100 | Minus |
| X | 23542271 | X | 16701677..16701897 | 229..9 | 1090 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:31:50 has no hits.
MXO02761.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:12 Download gff for
MXO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9675-PA | 1..750 | 9..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:14 Download gff for
MXO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spheroide-RA | 76..822 | 9..755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:49 Download gff for
MXO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spheroide-RA | 76..822 | 9..755 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:49 Download gff for
MXO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16701677..16701897 | 9..229 | 99 | | Minus |
| X | 16700887..16701412 | 230..755 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:14 Download gff for
MXO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16594920..16595445 | 230..755 | 100 | <- | Minus |
| arm_X | 16595710..16595930 | 9..229 | 99 | | Minus |
