MXO02766.5prime Sequence
879 bp (769 high quality bases) assembled on 2007-04-13
> MXO02766.5prime
CAGTCGACATGGCTGCCCTGGCCACGCTTGACTGCCCAGTACACGGATTC
CGAGAACGAGGGCGATGCTAGTCCGGATTCACAAAACTCCACGGCGTCCC
TGGTAATCATACCGCCCAAGCGACCCACGCCGACGCCCACCAAACAGGAC
GAAGAAAGCAAGCGATCTAAGGAGAAGAAAAAGAAGCGGGCCAAGAAGGT
GCGTCGGTTGGTGAGCTACCAGGATGACACCCTGATTTCTGACGAGGACG
AGGACCGCGCCGCAGCGTCCTCTAGTGAAGAGGAGTCCAGCAGTGGCGAC
GAGAGCAATAGTTCCAATTCCCAGAGCGAAGACAGTCCCAAAGCCAAGGA
TAAAAGCAATGCTGGTAGTGGTTCCTAGGACGGGGACACGCCCATGGAGG
TGGACGAGGAGCCGGCATGTTTCCCGGTCGAAGAACGCACGGCTGAGAGC
TACGAAAAGGATGCCAAGTACGCCAAGTACAAGTTCCAGCTGCCACCCGA
GCCAAAGGGGAAGCCGTCCGCCGAATTAGTGGCCAAAATCACTAAAATGT
ACACAAAGAATGAACCAGACCAATATGGACATGAATCGCGTAATACAGGA
TCGCAAGGAATTTCGCAATCCCAGCATATATGACAAACTAATAAGCTTTT
GCGACATCAACGAGTTCGGTACCAACTATCCGCCCGAGATCTATGATCCT
TTGCAGTGGGGCGAGGAGTCCTATTACGAGTCCTTGGCGGCGGTCCAGAA
AACGGAGATGGTGAAGCGGCAGATAGATCGCAAGGACATGGACAAGGTGG
AGCAGGCCACTGCGTTGGCCCGGAAAGTCGAGGAGGAGGCCCAAAAGCGC
AAATCCAAGTGGGATCAACCGGCACCTTC
MXO02766.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:27:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2063-PA | 978 | CG2063-RA | 1..869 | 9..879 | 4200 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2063-RA | 1195 | CG2063-RA | 128..996 | 9..879 | 4260 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9285603..9286353 | 849..98 | 3650 | 99.3 | Minus |
| 2R | 25286936 | 2R | 9286413..9286507 | 104..9 | 430 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:29:34 has no hits.
MXO02766.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:14 Download gff for
MXO02766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2063-PA | 1..869 | 9..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:53 Download gff for
MXO02766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2063-RA | 121..996 | 1..879 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:35 Download gff for
MXO02766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2063-RA | 121..996 | 1..879 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:35 Download gff for
MXO02766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9285509..9285538 | 850..879 | 100 | <- | Minus |
| 2R | 9285603..9286348 | 103..849 | 99 | <- | Minus |
| 2R | 9286415..9286514 | 1..102 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:53 Download gff for
MXO02766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5173014..5173043 | 850..879 | 100 | <- | Minus |
| arm_2R | 5173108..5173853 | 103..849 | 99 | <- | Minus |
| arm_2R | 5173920..5174019 | 1..102 | 95 | | Minus |
