MXO02771.5prime Sequence
708 bp (708 high quality bases) assembled on 2007-04-13
> MXO02771.5prime
CAGTCGACATGAGTTTGGTGTGGACTTTGATCGCCGGATTTCTCTATGCG
GAAATCGCACTGGTCCTTCTGCTGGTGCTGCCGGTGCTCACTCCTTACCG
CTGGAACCGGTTCTTCAAGTCCAAATTCCTATCGATGTTGGGACAACAGG
CGCACATATATTTCCTGCTGATCATGGGAATTCTGGTCATTTTCCTCCTG
GAGGCCATTCGCGAGATGCGCAAGTACTCCGGCTTGCAGCAGTCTAACGA
GGTCCACTTGAACGTGGAGATGCAGCACAGCATGAAGCTGTTCCGTGCCC
AGCGGAACTTCTACATCTCTGGATTCGCCATTTTCCTTGCCCTGGTCATC
CGGCGACTGGTAAACTTGATCTGCACCCAGGCCAATCTCATGGCCCAGAG
CGAGGCTTCCTTCAAGCAGGCACAGAGCGCCACTGCAGCCGCACGTTCCT
TGCTGGAGAACAAGAACACCGAGAAGGCCAAGGAAGCCGGCGAGGATACC
ACTCTCATCGAGCTCAACAAGCTGCGCGAGCGCGTCCAGGAGCTAACCTC
CGACTTGAATCGCGAAAAGAAGGACAAGGAGGCGGTTAAGTCGCAGGCGG
AGAGCATCAACCGCGAGTACGACCGACTCACCGAGGAGTACAGCAAGCTG
CAGAAGAAGATAACCATCGGCGGAGGCGGAAACAAGGATGATGCAAGCTT
TCTAGACC
MXO02771.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:28:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13887-PC | 687 | CG13887-RC | 1..684 | 9..692 | 3420 | 100 | Plus |
| CG13887-PB | 687 | CG13887-RB | 1..684 | 9..692 | 3420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13887-RE | 1446 | CG13887-RE | 261..944 | 9..692 | 3420 | 100 | Plus |
| CG13887-RB | 1262 | CG13887-RB | 261..944 | 9..692 | 3420 | 100 | Plus |
| CG13887-RC | 1159 | CG13887-RC | 158..841 | 9..692 | 3420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 838121..838624 | 9..512 | 2520 | 100 | Plus |
| 3L | 28110227 | 3L | 839248..839429 | 511..692 | 910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:47:07 has no hits.
MXO02771.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:16 Download gff for
MXO02771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13887-PB | 1..687 | 9..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:32 Download gff for
MXO02771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13887-RC | 150..851 | 1..703 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:08 Download gff for
MXO02771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13887-RC | 150..851 | 1..703 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:08 Download gff for
MXO02771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 838113..838624 | 1..512 | 99 | -> | Plus |
| 3L | 839250..839439 | 513..703 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:32 Download gff for
MXO02771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 838113..838624 | 1..512 | 99 | -> | Plus |
| arm_3L | 839250..839439 | 513..703 | 97 | | Plus |
