MXO02774.5prime Sequence
839 bp (753 high quality bases) assembled on 2007-04-13
> MXO02774.5prime
CAGTCGACATGAGATTGGTCATCTTGGAAACCAGCGACTCGGTGGGCAAG
TGGGCGGCCAAATATGTGATGAAACGCATCAATGACTTTCAGCCGAGTGC
CGACAGATACTTCGTTTTGGGCCTGCCCACGGGATCTACGCCATTGGGAA
TGTACAAAGAACTGATCGAGTTTCATAAGCAGGGCAAGGTATCCTTTCAG
TATGTGAAAACCTTCAATATGGATGAGTATGTGGGACTGGCCAGAGATCA
CCATGAGAGCTATCACTACTTCATGTGGAACAACTTCTTCAAGCACATCG
ACATTGAGCCCAAGAATGTGCACATTTTGGATGGCAATGCAGCTGATCTG
GTGGCCGAGTGCAATAAGTTCGAGGATCAGATCCGCGAGGCTGGAGGAGT
GGAGCTGTTCATCGGTGGCATCGGACCCGATGGCCATATTGCCTTCAATG
AGCCCGGCTCCTCATTGGTGTCCCGAACGCGGGTGAAAACTCTGGCGCAA
GATACACTTGAAGCGAATGCCCGTTTCTTTGACAACGATATGAGCAAGGT
GCCCAAACAGGCTTTAACCGTGGGCGTTGGCACTGTGATGGACTCCAAGG
AGGTGATGATCCTCATCACCGGAGCTCACAAGGCATTTGCCCTGTACAAG
GCCATCGAGGAGGGTGTGAATCACATGTGGACCGTCAGTGCCTTCCAGCA
GCATGCAAATACCCTGATGATCTGCGACGAGGATGCCACTTTGGAGCTGA
GAGTTAAGACCGTTAAATATTTCAAGGGCATTCTCAAAGATCTAGACGAA
GGCTCCCCACTGGAGGGCTACAAGAACGCAAGCTTTCTA
MXO02774.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:28:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6957-PA | 822 | Oscillin-RA | 1..815 | 9..823 | 4025 | 99.7 | Plus |
| CG6957-PB | 822 | Oscillin-RB | 1..815 | 9..823 | 4025 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oscillin-RH | 1299 | CG6957-RH | 218..1036 | 9..827 | 4050 | 99.6 | Plus |
| Oscillin-RF | 1388 | CG6957-RF | 218..1036 | 9..827 | 4050 | 99.6 | Plus |
| Oscillin-RC | 1206 | CG6957-RC | 208..1026 | 9..827 | 4050 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5548167..5548710 | 234..777 | 2705 | 99.8 | Plus |
| 2L | 23513712 | 2L | 5547971..5548101 | 105..235 | 655 | 100 | Plus |
| 2L | 23513712 | 2L | 5547815..5547912 | 9..106 | 490 | 100 | Plus |
| 2L | 23513712 | 2L | 5549015..5549067 | 775..827 | 235 | 96.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:32:07 has no hits.
MXO02774.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:17 Download gff for
MXO02774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6957-PB | 1..822 | 9..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:25 Download gff for
MXO02774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oscillin-RC | 208..1026 | 9..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:59 Download gff for
MXO02774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oscillin-RC | 208..1026 | 9..827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:59 Download gff for
MXO02774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5547805..5547912 | 1..106 | 96 | -> | Plus |
| 2L | 5547973..5548100 | 107..234 | 100 | -> | Plus |
| 2L | 5548168..5548709 | 235..776 | 99 | -> | Plus |
| 2L | 5549017..5549067 | 777..827 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:25 Download gff for
MXO02774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5547805..5547912 | 1..106 | 96 | -> | Plus |
| arm_2L | 5547973..5548100 | 107..234 | 100 | -> | Plus |
| arm_2L | 5548168..5548709 | 235..776 | 99 | -> | Plus |
| arm_2L | 5549017..5549067 | 777..827 | 96 | | Plus |
