MXO02775.5prime Sequence
633 bp (633 high quality bases) assembled on 2007-04-13
> MXO02775.5prime
CAGTCGACATGTGCGACTACAAGGTCTCGGAGCGGGCGTACGCCAAGTTG
ATATTCCACGCGGCCAAGTATCCACACCAGGCGGTCAACGGACTCTTGCT
GGCCGAGAAGACATCGAAGGGCTCCCAAGTGGAAATCGTGGATGCGATTC
CGCTTTTCCACCAGTGCCTGTATGTCACCCCCATGGCGGAGGTGGCCCTC
ATGCTGATCGATGCCCACGCCGAACGGGAAGGATTAGTAATCGCAGGCTA
CTACGCAGCACCGGAGAACTTCTACGACAACCAGGTCGACAAGACCCCAG
CCGCCAAGATAGCTGACAAGATCCAGGAGAACTTCAAGAACGCCTGCTTT
GTGGTGGTGGACAACAAACTGATGACGCTGCAGCACGACCGAGCCGCCAT
CCAGGTATTCAACTGTCCCGGAGACTCTGGAGCAAGGTGGTCAAAGGCCA
AGTTTACGCTCTCACAGGCGTCCGATACATTGGAAGGCGTGTCGCTGCTG
CTGAAGCGCGGAGCCATGCGGGATTTGGTTGACTTTGACAACCATCTAGA
TAATCCGGACAAAAACTGGACCAACGACTTCCTGAATCAGCCGCTCAACG
ATCTGCAGAAACTGTACGCAAGCTTTCTAGACC
MXO02775.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:28:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3501-PA | 612 | CG3501-RA | 1..609 | 9..617 | 3045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3501-RA | 888 | CG3501-RA | 92..700 | 9..617 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22881510..22881921 | 617..206 | 2060 | 100 | Minus |
| 2R | 25286936 | 2R | 22882402..22882599 | 206..9 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:08:16 has no hits.
MXO02775.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:17 Download gff for
MXO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-PA | 1..612 | 9..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:36 Download gff for
MXO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 87..700 | 2..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:30 Download gff for
MXO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 87..700 | 2..617 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:30 Download gff for
MXO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22882402..22882604 | 2..206 | 98 | | Minus |
| 2R | 22881510..22881920 | 207..617 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:36 Download gff for
MXO02775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18769033..18769443 | 207..617 | 100 | <- | Minus |
| arm_2R | 18769925..18770127 | 2..206 | 98 | | Minus |
