MXO02776.5prime Sequence
396 bp (396 high quality bases) assembled on 2007-04-13
> MXO02776.5prime
CAGTCGACATGGATCAACTCAAACTCAGACCTTGTAACTGCCTTACCGCA
CATCCACTGGCAGAGTGGGTGTGGGTGGAATGTGAGCGGCTGTGCACCCT
TCGTCTTGCCAGTTTTCGAAAAGGGTTCTCCGAAAAGGGTTGCCACCGCA
CCCCGATGCCCATTGAGGACTCATGGAGCAAACGGTTTCGGCATTTCCCT
TTTGTTTCCGCCTGCATCCTTTGGCCAAGACACGGACACCTTCCCCTTCC
CACCACGCTGCCACAATGGAAAATACAATTTTCGCAATCTTTGCTTATCT
TTTCATCTCTCTGTGGCTGCCTCGTTTGCTGCACGATTCGTTGTTGCTGC
TGTTGGCCATCCAGAAAATCGGTAAAAAGCGCAAGCTTTCTAGACC
MXO02776.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:28:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33062-PA | 375 | CG33062-RA | 1..372 | 9..380 | 1835 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33062-RB | 933 | CG33062-RB | 245..616 | 9..380 | 1845 | 99.7 | Plus |
| CG33062-RA | 954 | CG33062-RA | 266..637 | 9..380 | 1845 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19442106..19442394 | 380..92 | 1445 | 100 | Minus |
| 3L | 28110227 | 3L | 19446035..19446118 | 92..9 | 405 | 98.8 | Minus |
Blast to na_te.dros performed 2014-11-28 19:59:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1536..1626 | 355..267 | 117 | 63.4 | Minus |
MXO02776.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:18 Download gff for
MXO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33062-PA | 1..375 | 9..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:05 Download gff for
MXO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33062-RA | 258..641 | 1..385 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:00 Download gff for
MXO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33062-RA | 258..641 | 1..385 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:00 Download gff for
MXO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19442102..19442393 | 93..385 | 99 | <- | Minus |
| 3L | 19446035..19446124 | 1..92 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:05 Download gff for
MXO02776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19435202..19435493 | 93..385 | 99 | <- | Minus |
| arm_3L | 19439135..19439224 | 1..92 | 94 | | Minus |
