MXO02783.5prime Sequence
916 bp (807 high quality bases) assembled on 2007-04-13
> MXO02783.5prime
CAGTCGACATGTGGAAATACGGTCAAAACCAGGGTAATCAGGGACCATCG
AGCGGCGGCGGAGGAGGCGGGGGCCCCAACATGATGCCGATGGGTGGATT
TGGCATGCAGCACGGCAATATGCAGCAAATGCACATGTCGCCTCAACATC
AACAGCAGCAACAACAAATGGGCATGATGGGCGGCCCGGGTAGCATGCAG
ATGAATCCCCAAGGACCTGGAGGTCCTGGCGGCCTGATGCCCGGCATGTC
TCCGCAGCACCAGATGCAGCAACAGCAGCAGCAGCAGATGATGCAGCAGC
AAATGATGGTGCCCCAACAAGGAGTGGGCGTCGGAGTGGGAATGGGCGGT
GGTGTGGGAATGGGCGGAGGGGGAGTGGTTCCACAGCAGCAGCAACAGCA
GCCCCAACAAAACATGCCCCAGCAGAACATTCCCCAACAGCAACAGCAAC
TCAATCCGGTCGCAGGAATTCCACCCGGTGGAGCCGGGGGCAGCAACAAT
ATGCTGGCTATCTCGCAGCAAAATCCTCACAAGGAGATTAACATTGTGCA
GCTGTCCCGTCTCGGTCAGGAAACGGTGCAGGATATCGCCTCGCGCTTCC
AGGAGGTCTTCGCCTCCCTCAAGGGCATCCAGCCCACCTCGCACAGGGAA
AACAGCTCCGAGAAGAAGGTGCAGGAGTACTTCCGCACCATCCGGCTGCT
CTTCAAGAGGGTGCGCATCATCTACGAGAAGTGCAACGACGCCGGAATGG
ATTACATGAGCGCCGAGAGTCTGATTCCCTACCGCGATGAGCCGGAACCG
AGAATCGAGCCCTCGCTGTGCGATGAGTACCGGAAAGTCCTGCAGGAGAA
CCATGAACTCATAAAGACCGTCAAGCTGAAGAACAGGCAGCTACGCGAGA
TCATCGATCGGACACG
MXO02783.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:29:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17183-PA | 957 | MED30-RA | 1..908 | 9..916 | 4515 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED30-RA | 1103 | CG17183-RA | 80..987 | 9..916 | 4525 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 653103..654010 | 916..9 | 4525 | 99.9 | Minus |
Blast to na_te.dros performed 2014-11-28 19:59:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..7112 | 122..497 | 159 | 53.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2674 | 112..457 | 144 | 53.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2369..2682 | 107..432 | 132 | 54.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2601..2958 | 108..450 | 132 | 53.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2742..2947 | 102..306 | 125 | 55.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6793 | 108..167 | 119 | 70.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2795..2852 | 140..200 | 117 | 70.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6710..6882 | 129..301 | 117 | 55.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6802..6846 | 122..166 | 108 | 71.1 | Plus |
MXO02783.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:19 Download gff for
MXO02783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17183-PA | 1..908 | 9..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:19 Download gff for
MXO02783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED30-RA | 80..987 | 9..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:13 Download gff for
MXO02783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED30-RA | 80..987 | 9..916 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:13 Download gff for
MXO02783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 653103..654010 | 9..916 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:19 Download gff for
MXO02783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 653103..654010 | 9..916 | 99 | | Minus |
