Clone MXO02786 Report

Search the DGRC for MXO02786

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:27
Well:86
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG14823-RD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02786.5prime Sequence

411 bp (411 high quality bases) assembled on 2007-04-13

> MXO02786.5prime
CAGTCGACATGGAGCCCACATGCCTCAGCAGTGTGGCGGAATTGGCCAAA
TACAGTGAGGATGATGTGGAAACGGATGAGTCCAAGGTGGTGGAGCATCA
GGAATATGCCGAAGCGCTGTCAATGTCCGGGGAAAGTCGTAAGCGGAAAC
GATGGACTCGAAGGTCCTGCTGCACTCGCCAAGTCCTGAGTACGGGCGCC
ATTTTCATCGCCCTTCTGCTCATCATCGGCGCCATTTACATGCACTTAAG
ACAGAAGCATCATCTGGGCCGACTGCACATCAATCTCAAGGATCGGGGGC
AAGTGGAGGTCCTGGAGGAGGACTTTCCCATGGTCACCGCTGCGGGAGTG
GGTGAGTGTGCCACAAGGACTCTTGTTCAATCGCTAAGAAGCTCTGCAAG
CTTTCTAGACC

MXO02786.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:30:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-PD 390 CG14823-RD 1..387 9..395 1885 99.4 Plus
CG14823-PA 792 CG14823-RA 1..343 9..351 1665 99.4 Plus
CG14823-PB 351 CG14823-RB 1..343 9..351 1665 99.4 Plus
CG14823-PC 351 CG14823-RC 1..343 9..351 1665 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-RD 1108 CG14823-RD 66..457 4..395 1915 99.2 Plus
CG14823-RB 974 CG14823-RB 66..417 4..355 1700 98.9 Plus
CG14823-RA 2098 CG14823-RA 66..413 4..351 1695 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7066379..7066770 4..395 1915 99.2 Plus
Blast to na_te.dros performed on 2014-11-28 19:34:16 has no hits.

MXO02786.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:21 Download gff for MXO02786.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14823-PD 1..390 9..396 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:22 Download gff for MXO02786.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14823-RD 62..464 1..403 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:54 Download gff for MXO02786.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14823-RD 62..464 1..403 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:54 Download gff for MXO02786.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 7066375..7066777 1..403 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:22 Download gff for MXO02786.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7059475..7059877 1..403 98   Plus