MXO02793.5prime Sequence
750 bp (750 high quality bases) assembled on 2007-04-13
> MXO02793.5prime
CAGTCGACATGCTGACAAACTGTGCCTCCAAAACACTGGCCGCCGTGCGC
GCCAACATCCGGGCAATTGCCACCAGCAGTGCCCGGGCCAGCGACAATCT
GTTCGTCCATCGCGACACACCGGAGGATAATCCCAACATCCCGTTCGAGT
TCACGGCGGAGAACAAGAAGCGCGTGGAGGCCATACTCAGCATCTATCCG
GAGGGGCACAAGCGCGGCGCCATGATCCCGCTGCTTGATCTGGCACAGCG
CCAGTACGGCTGGCTGCCAATCTCTGCCATGCACAAGGTGGCCGAGATTC
TCCAGTTGCCCAATATGCGCGTCTACGAGGTGGCCACTTTCTATACGATG
TTCATGCGCAAGCCCACTGGCAAGTATCACATCCAGGTGTGCACCACCAC
ACCATGCTGGCTCCGCGGATCGGACGACATCCTGGAGACCTGCAAGAAGC
AGCTGGGCATCGGCGTCGGCGACACCACCAAGGACAGGAAGTTCACCATC
TCGGAGGTCGAGTGCTTGGGCGCCTGTGTCAATGCGCCAATGGTGGCGAT
CAACGATGACTACTATGAGGATCTGACATCCAAGGACATGCAGGACATCC
TGAACGACCTGAAGGCGGATAAGATATCGCCCCCTGGGCCACGCAACGGA
CGCTTTGCCAGCGAGCCAAAGGGCGAGCCCACTTCCCTGAGCGAGGAGCC
CAAGGGTCCTGGCTTTGGTCTGCAGGCCGGTCTGGCAAGCTTTCTAGACC
MXO02793.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5703-PA | 729 | CG5703-RA | 1..726 | 9..734 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5703-RB | 906 | CG5703-RB | 102..827 | 9..734 | 3630 | 100 | Plus |
| CG5703-RA | 1064 | CG5703-RA | 260..985 | 9..734 | 3630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17632589..17633109 | 47..567 | 2605 | 100 | Plus |
| X | 23542271 | X | 17633263..17633430 | 567..734 | 840 | 100 | Plus |
| X | 23542271 | X | 17632422..17632460 | 9..47 | 195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:32:21 has no hits.
MXO02793.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:23 Download gff for
MXO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5703-PA | 1..729 | 9..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:33 Download gff for
MXO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5703-RA | 253..985 | 1..734 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:08 Download gff for
MXO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5703-RA | 253..985 | 1..734 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:08 Download gff for
MXO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17632415..17632460 | 1..47 | 91 | -> | Plus |
| X | 17632590..17633108 | 48..566 | 100 | -> | Plus |
| X | 17633263..17633430 | 567..734 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:33 Download gff for
MXO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17526448..17526493 | 1..47 | 91 | -> | Plus |
| arm_X | 17526623..17527141 | 48..566 | 100 | -> | Plus |
| arm_X | 17527296..17527463 | 567..734 | 100 | | Plus |
