MXO02794.5prime Sequence
587 bp (587 high quality bases) assembled on 2007-04-13
> MXO02794.5prime
GTGGGGGTCATCAGTCGACATGTTTATAGTTTTGGTCGTTTGTTTGCTGG
CAGTCGCTGCGGCCGATGTGTCCCATCTGGTCACCCCGGAACCGAAGGTT
CCAGCAAGTCCGTATGTGTTCAGCTACCAAGCTGGCCGTGCTCCCGGCCA
TGTGGATCGCCAGCATACCGAGGTGTCCGATGGATCGGGTGTGATCCGCG
GTGCTTTCCCCTATGTGGACCCAAAGAACCAGGTGCGCACCGTACAGTAT
GTGGCGGATGAGCATGGTTTCCATCCTCAGCTTAGCCACAAACTGGAGGA
CAGCGCCGCCGTCCAGGCAGCCAAGCAAAGGCACTTCGCGGCCTACAATC
GGATTGCGCAAGAGCATGCCAACCACACTCCAGGCCAAGTTGCACTAGCA
AATGCCCCCCATGCCAGCGCCGCCGTTGCACATGCCACCCAGAAGCACCT
GAGCGCCTTCGAGCGGATCGCTGCCGAGCACGCGGCCATTGGACGCCAAC
AGGAGGCACAGCGTCTGGCGCTGGCCGCTCAATCTGAGCATGGAGAGATC
GAAGATGGACAGTACCATCCGGCAAGCTTTCTAGACC
MXO02794.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18066-PA | 555 | CG18066-RA | 1..552 | 20..571 | 2710 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp57d-RB | 1488 | CG30150-RB | 50..602 | 19..571 | 2735 | 99.6 | Plus |
| Cpr57A-RB | 1488 | CG18066-RB | 50..602 | 19..571 | 2735 | 99.6 | Plus |
| Cpr57A-RA | 656 | CG18066-RA | 50..602 | 19..571 | 2735 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20549631..20549989 | 392..34 | 1765 | 99.4 | Minus |
| 2R | 25286936 | 2R | 20549382..20549561 | 571..392 | 900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:25:53 has no hits.
MXO02794.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:24 Download gff for
MXO02794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18066-PA | 1..555 | 20..572 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:27 Download gff for
MXO02794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr57A-RA | 43..602 | 12..571 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:07 Download gff for
MXO02794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr57A-RA | 43..602 | 12..571 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:07 Download gff for
MXO02794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20549382..20549561 | 392..571 | 100 | <- | Minus |
| 2R | 20549632..20549988 | 35..391 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:27 Download gff for
MXO02794.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16436887..16437066 | 392..571 | 100 | <- | Minus |
| arm_2R | 16437137..16437493 | 35..391 | 99 | <- | Minus |
