MXO02796.5prime Sequence
639 bp (639 high quality bases) assembled on 2007-04-13
> MXO02796.5prime
CAGTCGACATGGTTTTCTTTGGATTTCCTCAAATTTCAAGGCACTTTTCT
AAGTTTACCAAGATGTCGAAAAGCGCGCTGGTGATTTTGGCTCCCGGAGC
GGAGGAGATGGAGTTCATCATAGCCGCCGACGTTCTGAGAAGGGCGGGCA
TCAAGGTCACCGTAGCCGGTTTGAATGGCGGGGAAGCGGTGAAGTGCTCG
CGGGATGTGCAGATCCTGCCGGACACCTCGCTGGCCCAGGTTGCCTCGGA
TAAGTTCGATGTGGTGGTGCTGCCCGGCGGACTGGGTGGCTCCAATGCCA
TGGGGGAGTCCTCGCTGGTCGGTGACTTGCTGCGCAGCCAGGAGTCTGGT
GGCGGACTCATCGCCGCCTTCTGTGCCGCGCCCACCGTTTTGGCCAAGCA
CGGCGTCGCCTCCGGGAAATCCCTCACCTCGTATCCCTCAATGAAGCCCC
AGCTGGTGAATAACTATAGCTATGTGGACGACAAGACGGTGGTCAAGGAT
GGCAATCTGATCACCAGTCGAGGTCCTGGCACCGCCTACGAGTTCGCCCT
CAAAATCGCCGAGGAGCTGGCGGGCAAGGAGAAAGTCCAGGAGGTGGCCA
AGGGTCTTCTTGTGGCCTACAACGCAAGCTTTCTAGACC
MXO02796.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1349-PA | 618 | dj-1beta-RA | 1..615 | 9..623 | 3050 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dj-1beta-RA | 733 | CG1349-RA | 27..642 | 8..623 | 3065 | 99.8 | Plus |
| DJ-1alpha-RA | 735 | CG6646-RA | 115..581 | 69..532 | 290 | 71.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30807348..30807671 | 150..473 | 1590 | 99.4 | Plus |
| 3R | 32079331 | 3R | 30807732..30807887 | 468..623 | 780 | 100 | Plus |
| 3R | 32079331 | 3R | 30807143..30807284 | 8..149 | 710 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:47:11 has no hits.
MXO02796.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:24 Download gff for
MXO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1349-PA | 1..618 | 9..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:34 Download gff for
MXO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dj-1beta-RA | 21..645 | 1..627 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:09 Download gff for
MXO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dj-1beta-RA | 21..645 | 1..627 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:09 Download gff for
MXO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30807734..30807890 | 470..627 | 98 | | Plus |
| 3R | 30807137..30807284 | 1..149 | 97 | -> | Plus |
| 3R | 30807348..30807667 | 150..469 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:34 Download gff for
MXO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26632859..26633006 | 1..149 | 97 | -> | Plus |
| arm_3R | 26633070..26633389 | 150..469 | 99 | -> | Plus |
| arm_3R | 26633456..26633612 | 470..627 | 98 | | Plus |
