MXO02803.5prime Sequence
854 bp (702 high quality bases) assembled on 2007-04-17
> MXO02803.5prime
CAGTCGACATGGCTGCTCAGTTCTTTAATCGCATTGGCCAAATGGGCCTC
GGAGTGGCCGTTTTGGGTGGCGTTGTCAATTCGGCATTATATAATGTGGA
AGGCGGCCACCGGGCGGTCATCTTCGATCGCTTCACCGGCATCAAGGAGA
ACGTGGTCGGCGAGGGTACCCACTTCTTCATCCCATGGGTGCAGCGGCCC
ATCATCTTCGACATCCGGTCCCAGCCCCGCAACGTTCCTGTGATAACGGG
CAGCAAGGATCTGCAGAATGTCAACATCACGCTCCGAATCCTGTACCGCC
CCATTCCAGACCAGCTGCCCAAGATCTACACCATTCTCGGCCAGGACTAC
GACGAGCGTGTCCTGCCCTCCATCGCGCCTGAGGTGCTGAAGGCTGTGGT
CGCCCAGTTCGACGCCGGCGAGCTGATCACCCAGCGTGAGATGGTGTCGC
AGCGCGTTTCCCAGGAACTGACTGTACGTGCCAAGCAGTTCGGCTTTATT
CTGGATGACATCTCGCTCACGCACTTGACCTTCGGTCGGGAGTTCACGCT
GGCCGTCGAAGATGAAGCAGGTGGCCCAGCAGAGAGGCGGAGAAGGCGCG
TTTTGTCGTGGAGAAGGCCGAGCAACAGAAGCTGGCGTCCATCATTTCGG
CGGAGGGTGATGCCGAAGCCGCTGGCCTGTTGGCCAAGTCATTCGGCGAG
GCCGGAGACGGTCTGGTGGAGCTGCGACGTATTGAGGCCGCCGAGGATAT
CGCCTACCAGCTATCCCGGTCCCGTGGTGTCGCCTACTTGCCCAGCGGAC
AGAGCACGCTGCTCAATCTGCCATCGACCATCGCGCAGGCAAGCTTTCTA
GACC
MXO02803.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:31:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10691-PB | 831 | l(2)37Cc-RB | 1..828 | 9..838 | 4070 | 99.7 | Plus |
| CG10691-PA | 831 | l(2)37Cc-RA | 1..828 | 9..838 | 4070 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cc-RD | 2022 | CG10691-RD | 118..945 | 9..838 | 4100 | 99.8 | Plus |
| l(2)37Cc-RA | 1325 | CG10691-RA | 102..929 | 9..838 | 4100 | 99.8 | Plus |
| l(2)37Cc-RB | 1327 | CG10691-RB | 118..945 | 9..838 | 4100 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19123121..19123552 | 440..9 | 2160 | 100 | Minus |
| 2L | 23513712 | 2L | 19122422..19122819 | 838..439 | 1900 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:47:14 has no hits.
MXO02803.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:26 Download gff for
MXO02803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10691-PA | 1..831 | 9..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:06 Download gff for
MXO02803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RB | 118..950 | 9..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:48 Download gff for
MXO02803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cc-RB | 118..950 | 9..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:48 Download gff for
MXO02803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19122417..19122817 | 441..845 | 98 | <- | Minus |
| 2L | 19123121..19123552 | 9..440 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:06 Download gff for
MXO02803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19122417..19122817 | 441..845 | 98 | <- | Minus |
| arm_2L | 19123121..19123552 | 9..440 | 100 | | Minus |
