MXO02804.5prime Sequence
798 bp (794 high quality bases) assembled on 2007-04-17
> MXO02804.5prime
CAGTCGACATGCTTGGTAGAATCGCAGTTTTATTATTGCTCGTCGGTCTT
TTTGGCCCGGAAGTTCGGTCGGCGAAAGTGAATGATGACCAGTGCGGTGC
ATTCGACGAAGATCAGATGCTCAATATGCAAAGCACCTTCGCCATTCCCA
CGGAGCACCAGTGGGTGGCCCGGATAGTGTATGGCAAGGGGTTTGAGGGC
AAGATTCGGGACAATGGATGTCTGGGCGTGCTGGTATCGAAGCGCACTGT
CTTGGCGCCCGCCCACTGTTTTGTCCAGTACAACGGAGTAGCGGAGGCCT
TCTCCGTCCACCTGGGTGTCCACAACAAGAGTGCTCCGGTCGGAGTGCGA
GTCTGCGAAACGGATGGCTATTGCGTGCGTCCGTCGCAGGAAATCAAGCT
GGCCGAGATAGCCATCCATCCGGACTACGACTCGCGAACCTTAAAGAACT
CCCTGGCGGTGCTGACTCTTCAGCGAGACGCAAAGATCTACCCAAATGTA
ATGCCAATTTGCATGCCACCTCCAAGCCTGCTCAACGAGACCCTGGTTGC
TCAGACGTTTGTAGTAGCTGGTCTTCGCGTCTTTGAGGACTTCAGACTAA
AGACCTGGGTAAACACGCTGAGTCGCGGCTTCTGTCAATCGAAGGTCAAG
ACGCTGGTGACCAGCAGCAACACGGTTTGTGGCTACCACAAGCAACCGGT
AGCTTATTACTTGGGCGCACCTCTAGTGGGGTTGCAGAAGAAGGGGCACG
TCACTCAGAACTACTACCTGGTGGGCATCATGATCGACTGGCGCTGGG
MXO02804.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:32:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31199-PA | 882 | CG31199-RA | 1..790 | 9..798 | 3950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31199-RA | 1013 | CG31199-RA | 105..894 | 9..798 | 3950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20742919..20743528 | 798..189 | 3050 | 100 | Minus |
| 3R | 32079331 | 3R | 20743584..20743765 | 190..9 | 910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:33 has no hits.
MXO02804.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:26 Download gff for
MXO02804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31199-PA | 1..790 | 9..798 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:12 Download gff for
MXO02804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31199-RA | 98..894 | 1..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:39 Download gff for
MXO02804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31199-RA | 98..894 | 1..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:39 Download gff for
MXO02804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20742919..20743527 | 190..798 | 100 | <- | Minus |
| 3R | 20743585..20743769 | 1..189 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:12 Download gff for
MXO02804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16568641..16569249 | 190..798 | 100 | <- | Minus |
| arm_3R | 16569307..16569491 | 1..189 | 97 | | Minus |
