MXO02818.5prime Sequence
747 bp (747 high quality bases) assembled on 2007-04-17
> MXO02818.5prime
CAGTCGACATGCCCACCAAGAAGTGCTACTGCCCCGTCACTCATGTCATC
TTTGACTGCGATGGAACCTTGATAGATAGCGAAGGCATCTACCTCAAAAC
GGTTCAAGACTTGTTGGCTAAATATGGCAAAACGTACACCAAAGTCGATC
AGACGCAGCATATGGGAATGCCGGTCGGTACATTTTCCCAACACATCGTC
AAGGATCTAAAACTTCCGTTGTCACCTGCGGAATTTCAAAAGGAATTCGA
GGCAGCTGTTGATAAGAGCATGGGAAGTGTGGCTCTGCTGCCAGGGGTCA
GGGATCTGATTCTCCACTTGCACGAATACCGCATACCCTTCTGCATAGCC
ACAAGTTCGTTTAGGAAACTGTTCAAAGTGAAGGCCGAGTCCTTCAAGGA
TATATTCCTGGCCTTTCACCACGTTGTCTGTGGCGATGATCCGGCACTTG
GACCGGGAAGAGGAAAGCCCTACCCAGATATATATCTCCTGGCCGCCTCG
CGATTCAATCCGCCCGCAGATCCCAAAAAGTGTCTTATATTCGAGGATGC
TCCAGTGGGGCCTCATANGGCGGAAAGGCAGCNGGGATCCCAAGTCATCT
TTATTCCAACTGATAACGTTTCCAAGCAGCAGAAAAAGGGCGCCACCATG
GTTCTAAAATCGATGGCGGACTTTAAGCCTGAGCTCTTTGGTCTACCACC
CTTTGACACCTGCTCCAAATTCGAGTTTGGCGCAAGCTTTCTAGACC
MXO02818.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:33:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5565-PA | 723 | CG5565-RA | 1..720 | 9..731 | 3470 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:54:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5565-RA | 942 | CG5565-RA | 157..876 | 9..731 | 3525 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:54:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1354977..1355631 | 731..74 | 3140 | 99.5 | Minus |
| 2L | 23513712 | 2L | 1355702..1355768 | 75..9 | 320 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:54:10 has no hits.
MXO02818.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:29 Download gff for
MXO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5565-PA | 1..723 | 9..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:02 Download gff for
MXO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5565-RA | 147..879 | 1..735 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:31 Download gff for
MXO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5565-RA | 147..879 | 1..735 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:31 Download gff for
MXO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1354974..1355629 | 76..735 | 99 | <- | Minus |
| 2L | 1355702..1355774 | 1..75 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:02 Download gff for
MXO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1354974..1355629 | 76..735 | 99 | <- | Minus |
| arm_2L | 1355702..1355774 | 1..75 | 93 | | Minus |
