MXO02819.5prime Sequence
841 bp (814 high quality bases) assembled on 2007-05-15
> MXO02819.5prime
CAGTCGACATGTGGGGCGCTATTGCAGCGATCACAGCTCTGGCAATTGGA
GTCCTCTGTTCTCTGGGCAATGGAGAGTACTTGGAACCGAGGTGCGGGCT
AACTGCAAATACTATCGCTTTTAAAATAATTGGTGGCAGAGATGCGATCA
TAAACTCAAATCCGTGGATGGCCTACATCCATTCCTCCGTCAAATTAATC
TGCGGAGGAACTCTCATTACCCAGCGGTTTGTCCTAACAGCAGCGCATTG
TGTTAACGAAGGAAGTGCGGTAAAGGTGCGACTCGGTGAGTACGATGATA
CTGCGACAGAGGACTGCAACAGCAAGATCTGCATCCCAAGGGCTGAGGAG
CACGATGTGGACATGGCCTTCCGGCATGGAAAGTTCTCTGAGATCAAAAA
CCTGAACGACATCGCGCTCCTTCGCTTGGCCAAATTTGTGACTTTCAAAG
CTCACATCTCGCCCATTTGCATCATTTTGGGTACCTCCAAGAGGGAATTA
GTCGATAGCATAGAATGGTTTGTTGCCACCGGTTGGGGCGAGACTAGAAC
ACACAGGACACNGAGGTGTTCTGCAGATCACCCAGCTCCAGCGCTATAAT
TCATCCCAGTGCATGCAAGCTCTTGGCAGGTTAGTGCAGCAGAACCAAAT
TTGCGCCGGACGCCTTGGATCCGATACGTGCAACGGAGACTCCGGCGGTC
CGCTCTTCCAGACTGTGCGCCACATGGACAAAATGCGTCCCGTGCAATTC
GGAGTCGTCAGCTACGGCAGCAGGGAGTGCTCCGGAATCGGTGTCTATAC
GGATGTGTACAGCTACGCCGATTGGATCGCAACCGTGGTGC
MXO02819.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:12:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30090-PA | 876 | CG30090-RA | 1..553 | 9..561 | 2765 | 100 | Plus |
| CG30090-PA | 876 | CG30090-RA | 554..832 | 563..841 | 1395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30090-RA | 999 | CG30090-RA | 23..854 | 9..841 | 4140 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15690478..15690869 | 449..841 | 1915 | 99.7 | Plus |
| 2R | 25286936 | 2R | 15689848..15690065 | 9..226 | 1090 | 100 | Plus |
| 2R | 25286936 | 2R | 15690254..15690432 | 272..450 | 895 | 100 | Plus |
| 2R | 25286936 | 2R | 15690121..15690166 | 226..271 | 230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:22:17 has no hits.
MXO02819.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:12:30 Download gff for
MXO02819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30090-PA | 1..832 | 9..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:20:32 Download gff for
MXO02819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30090-RA | 11..854 | 1..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:35 Download gff for
MXO02819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30090-RA | 11..854 | 1..841 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:09:35 Download gff for
MXO02819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15689836..15690064 | 1..225 | 98 | -> | Plus |
| 2R | 15690121..15690166 | 226..271 | 100 | -> | Plus |
| 2R | 15690254..15690432 | 272..450 | 100 | -> | Plus |
| 2R | 15690480..15690869 | 451..841 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:20:32 Download gff for
MXO02819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11577341..11577569 | 1..225 | 98 | -> | Plus |
| arm_2R | 11577626..11577671 | 226..271 | 100 | -> | Plus |
| arm_2R | 11577759..11577937 | 272..450 | 100 | -> | Plus |
| arm_2R | 11577985..11578374 | 451..841 | 99 | | Plus |
