MXO02821.5prime Sequence
498 bp (498 high quality bases) assembled on 2007-04-17
> MXO02821.5prime
CAGTCGACATGGATATAACGGTACCGCCGCCGGACTCGCACTGGTCGTTG
AGGTTTGTGGACATCGTGAAGCCTTTTCCAAAACATACTTTGGCCAATGC
CACTTATAAGATCATTCGCTTCTTTTACCCACCCTTTGCCCTGGAAACCG
TCGATGTCACCCACGTGGTCAGCGATCCCGAGCTGAATAGTTTAAACGTG
GGGCTGTTTGTGGTAGTTCCCTTAATTCTGGCCTGCATCGGCTATGGGGT
GTACAAATATGTGCGGAGTATGCATACAGTGGCTAAACGGACACCATTAA
AATTGTACGAGCTTGAACAGCGTATGAAAGACAAGTACGGTCCGGAATAC
AAGCAGGGAATCTGGAAGCGAAAGGACATTTCTGACCCCCTCCTATTAAC
CACTGATCCATCCGAACCAAAAGCAAAGAGATGTGAAAGCAGCAATGCCC
ACTGGCTGCGCAAAACCGATAGATCCGATGATGCAAGCTTTCTAGACC
MXO02821.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:33:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32450-PA | 477 | CG32450-RA | 1..474 | 9..482 | 2370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32450-RA | 821 | CG32450-RA | 117..590 | 9..482 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22329894..22330157 | 9..272 | 1320 | 100 | Plus |
| 3L | 28110227 | 3L | 22330216..22330426 | 272..482 | 1055 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:29:58 has no hits.
MXO02821.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:30 Download gff for
MXO02821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32450-PA | 1..477 | 9..486 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:07 Download gff for
MXO02821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32450-RA | 117..595 | 9..490 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:47 Download gff for
MXO02821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32450-RA | 117..595 | 9..490 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:47 Download gff for
MXO02821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22329894..22330157 | 9..272 | 100 | -> | Plus |
| 3L | 22330217..22330431 | 273..490 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:07 Download gff for
MXO02821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22322994..22323257 | 9..272 | 100 | -> | Plus |
| arm_3L | 22323317..22323531 | 273..490 | 98 | | Plus |
