Clone MXO02822 Report

Search the DGRC for MXO02822

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:28
Well:22
Vector:pMK33-CTAP-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02822.5prime Sequence

859 bp (723 high quality bases) assembled on 2007-04-17

> MXO02822.5prime
CAGTCGACATGAGAAGGCACTTGCGGGCAAGTCTTTGGATCCTTTGTTTG
GCCACCATGGCGTTTTCCATCCTTGCGGCAGTAAATACTTCGCCCAAACC
AACGCTGACTTCGGCGTTTAGTGGAAAAGCTGGCACCACTGCCGTGAAGG
CGAATAAGACGACGGGTGAGCTGCTGCCCATGGTCATTAACACTTGGAAC
TTCACGGCTGCCAATGTGCTCGCCTGGCGAATCCTGAAGCAAAGCAAGGG
TGGACTCCGGCAGACGCGGAATGCGGTAGTGGAGGGCTGCTCGAAGTGTG
AGAAACTCCAGTGTGACCGAACGGTGGGCTATGGCGGATCGCCGGACGAG
TTGGGCGAAACCACACTGGATGCCATGGTCATGGACGGGGCCACCATGGA
TGTGGGGGCAGTGGCTGGTCTGCGACGCATTAAGGATGCCATTAAGGTAG
CCCGGCATGTTCTGGAACACACGCAGCACACCATGCTGGTGGGTGATGCG
GCGTCAGCTTTCGCCAATGCTATGGGATTCGAATCAGAGTCGCTGGTCAC
GCCGGAGTCGAAGGACATGTGGTTACAGTGGACGGCTGAGAACTGCCAGC
CAAACTTCTGGAAGAACGTTCACCCGGATCCCAAGGTCTCTTGCGGCCCG
TATAAGCCGCGGCCGACTCCGCTGACCCGCTGGAAGGAGGACCGTGCCCG
CAATGAGTATGAGATCGGACGCAAGAACCACGATACCATCGGCATGATCG
CCATCGACGTGGAAAGCAACATCCACGCCGGCACCTCCACCAACGGGGCG
CGGCACAAGATTCCCGGACGGGTCGGCGACTCCCCCATTCGGGGTGCTGG
CGCTTATGC

MXO02822.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:33:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG1827-PA 1182 CG1827-RA 1..851 9..859 4230 99.8 Plus
CG1827-PB 1011 CG1827-RB 1..680 180..859 3375 99.8 Plus
CG12928-PA 837 CG12928-RA 1..63 70..8 315 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG1827-RD 1341 CG1827-RD 100..951 8..859 4245 99.9 Plus
CG10474-RA 1273 CG10474-RA 256..419 366..529 235 77 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9589314..9590053 120..859 3685 99.9 Plus
2R 25286936 2R 9589149..9589262 8..121 570 100 Plus
2R 25286936 2R 19286249..19286412 529..366 235 76.2 Minus
Blast to na_te.dros performed on 2014-11-28 22:22:18 has no hits.

MXO02822.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:30 Download gff for MXO02822.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1827-PA 1..851 9..859 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:24 Download gff for MXO02822.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1827-RD 100..951 8..859 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:31 Download gff for MXO02822.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1827-RD 100..951 8..859 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:31 Download gff for MXO02822.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9589149..9589262 8..121 100 -> Plus
2R 9589316..9590053 122..859 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:24 Download gff for MXO02822.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5476654..5476767 8..121 100 -> Plus
arm_2R 5476821..5477558 122..859 99   Plus