Clone MXO02823 Report

Search the DGRC for MXO02823

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:28
Well:23
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG10934-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02823.5prime Sequence

606 bp (606 high quality bases) assembled on 2007-04-17

> MXO02823.5prime
CAGTCGACATGGTGGTTGTACAGGGAATGTACGAAGTCACGGAGCTGGTG
GCTGGCAGCGTGGGATGCGTGTGTCTATACATCGCCGGATGCAATGTGCT
GCCCATGGAGCATATTCCCGATCTTCCGTCGGCGCTGTTCGTCCTGACCG
CCGTGCTTTTTCTCCATCATCTGAGGGTAATGAATTGCGCACCGCTGCAG
AAGCTTTGGCTTTTGCTGCTGGAACTGTTGGTCTTCTATATGTGCACCCA
GGTCGTGGTGCTTGTGTGGCTCCAGTTGCTCAGCCATATGAATAAACTGC
GGGACAATGCAGTTAATACTCGTACCGGCATGTACCTTTTTGAAGCCTAT
CCAAAAGTCTTTATGTTTTTGCGCCTTTATGTCTCCTATTTGGGGCAGCT
TATCATGTCCGTGGCGTGCACCTACAAGGCGATAATGGTCACTCATGCCC
TGGACTACGCCCTACCAAATCGCCGGACGTACAGATACTATGAGACAGAT
GAGAACTTAGGCGATGGTCCGCGGCGTCCTACCCGAAAGAGCAACCAGCG
ATCAACACCCAAGAAGAGCACCGTGCGTGGTCGCAAAAAAGCAAGCTTTC
TAGACC

MXO02823.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-PA 585 CG10934-RA 1..367 9..375 1835 100 Plus
CG10934-PA 585 CG10934-RA 371..582 379..590 1035 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10934-RA 1043 CG10934-RA 80..661 9..590 2850 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17722418..17722999 9..590 2850 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 22:32:28 has no hits.

MXO02823.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:31 Download gff for MXO02823.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-PA 1..585 9..591 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:38 Download gff for MXO02823.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 9..600 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:13 Download gff for MXO02823.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10934-RA 80..672 9..600 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:13 Download gff for MXO02823.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17722418..17723010 9..600 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:38 Download gff for MXO02823.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13609923..13610515 9..600 98   Plus