MXO02829.5prime Sequence
669 bp (669 high quality bases) assembled on 2007-04-17
> MXO02829.5prime
CAGTCGACATGCCACGAGGAAAGTTCGTCAACCACAAAGGTCGCAGTCGC
CATTTCACATCTCCCGAGGAACTGCAACAGGAATCGGAGGAGGATAGCGA
CCAGACCAGCGGCTCGGGATCAGATAGCGACGATAAAGACGCTGCCGGCG
GCAAAGCCAGTTCCTCTGCGTCCAAAGCCAAGGCACCCGCCACACGTAAA
GCGCCCGTGAATCGCAATCAAAAGTCTCGATCAGCGGCGGGCGCCGGTGC
GGCAAGTTCCTCGGAATCGGAGTCTGGCGAGGATTCCGACGATGACTCCG
AAGCGGAAGCGCGCGATGCCAAGAAGGGCGTGGCCTCACTCATCGAAATC
GAGAATCCCAACCGGGTGACCAAGAAGGCCTCACAAAACCTATCGGCCAT
CAAGCTGGACGACGGGCCAGCCGGTGCCGGCGGTAATCCCAAGCCGGAGC
TTTCTCGCCGCGAACGCGAACAGATCGAAAAGCAGAGAGCGCGCCAGCGT
TACGAGAAACTCCATGCTGCTGGTAAAACCACCGAGGCTAAGGCCGATCT
GGCCAGATTGGCTTTGATCCGGCAGCAGCGCGAGGAGGCGGCCGCCAAGC
GGGAGGCGGAAAAGAAGGCAGCCGATGTGGGCACCAAAAAGCCGGGTGCC
AAGGCAAGCTTTCTAGACC
MXO02829.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11444-PA | 648 | CG11444-RA | 1..645 | 9..653 | 3175 | 99.6 | Plus |
| CG4438-PA | 570 | CG4438-RA | 410..497 | 496..583 | 190 | 88.6 | Plus |
| CG4438-PA | 570 | CG4438-RA | 274..328 | 324..378 | 175 | 92.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11444-RB | 1282 | CG11444-RB | 416..1061 | 8..653 | 3200 | 99.7 | Plus |
| CG11444-RA | 1081 | CG11444-RA | 215..860 | 8..653 | 3200 | 99.7 | Plus |
| CG4438-RB | 922 | CG4438-RB | 571..741 | 483..653 | 420 | 83 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4553338..4553983 | 653..8 | 3200 | 99.7 | Minus |
| 2L | 23513712 | 2L | 9397180..9397350 | 653..483 | 420 | 83 | Minus |
| 2L | 23513712 | 2L | 9397617..9397747 | 138..8 | 325 | 83.2 | Minus |
| 2L | 23513712 | 2L | 9397409..9397498 | 388..299 | 240 | 84.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:08:44 has no hits.
MXO02829.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:32 Download gff for
MXO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11444-PA | 1..648 | 9..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:45 Download gff for
MXO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11444-RA | 208..860 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:42 Download gff for
MXO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11444-RA | 208..860 | 1..653 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:42 Download gff for
MXO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4553338..4553986 | 1..653 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:45 Download gff for
MXO02829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4447371..4448019 | 1..653 | 99 | | Minus |
