MXO02830.5prime Sequence
471 bp (471 high quality bases) assembled on 2007-04-17
> MXO02830.5prime
CCCCTAAGAGGAAGTTATCAGTCGACATGGGCAAGCCAAGAGCCCTGCGG
GGTGCCAGGAAGCATGTGAACCACCGTCGCGACCAGCGTTGGGCCGACAA
GGACTACAAGAAGGCTCATTTGGGCACCAGATGGAAGGCTAATCCCTTCG
GAGGTGCTTCCCACGCCAAGGGAATCGTCCTGGAGAAGGTCGGCGTCGAG
GCCAAGCAGCCTAACTCTGCCATCCGCAAGTGCGTGAGGGTGCAGCTCAT
CAAGAACGGCAAGAAGATCACCGCCTTCGTGCCCCGTGACGGTAGCTTGA
ACTACATTGAGGAGAACGACGAGGTCCTGGTTGCCGGTTTCGGTCGTAAG
GGTCATGCCGTCGGTGATATTCCCGGTGTGCGCTTCAAGGTTGTCAAGGT
CGCCAACGTCTCCCTGTTGGCCCTCTACAAGGAGAAGAAGGAACGCCCAA
GATCTGCAAGCTTTCTAGACC
MXO02830.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8415-PA | 432 | RpS23-RA | 27..429 | 53..455 | 2015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS23-RA | 865 | CG8415-RA | 95..523 | 27..455 | 2070 | 98.8 | Plus |
| RpS23-RB | 553 | CG8415-RB | 46..474 | 27..455 | 2070 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14215438..14215702 | 455..191 | 1325 | 100 | Minus |
| 2R | 25286936 | 2R | 14215951..14216111 | 190..30 | 730 | 96.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:22:21 has no hits.
MXO02830.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:33 Download gff for
MXO02830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8415-PA | 1..432 | 27..456 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:26 Download gff for
MXO02830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS23-RB | 46..474 | 27..455 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:32 Download gff for
MXO02830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS23-RB | 46..474 | 27..455 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:32 Download gff for
MXO02830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14215438..14215702 | 191..455 | 100 | <- | Minus |
| 2R | 14215951..14216114 | 25..190 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:26 Download gff for
MXO02830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10102943..10103207 | 191..455 | 100 | <- | Minus |
| arm_2R | 10103456..10103619 | 25..190 | 95 | | Minus |
