MXO02831.5prime Sequence
730 bp (598 high quality bases) assembled on 2007-04-17
> MXO02831.5prime
CCCCCCCTAAAGGGACGTTATCAATCNACATGGTTAAAAACGAGCTCTAC
GGGGGGGGGGAGCGCATCATGGACAAGCGCATTACCAGCGAAGGCAAGGT
TGAGTACTACATCAAGTGGCGTGGCTACACGTCGGCGGACAACACCTGGG
AGCCCGAGGAGAACTGCGATTGCCCGAATCTCATCCAGAAATTCGAGGAG
TCGCGCGCCAAGTCCAAGAAGCGCGGCGAGAAGAAACCCAAGTGCGAAGA
GATCCAGAAGCTGCGCGGCTACGAGCGCGGCTTGGAGCTGGCCGAGATCG
TGGGCGCAACGGATGTGACGGGCGACATCAAGTATCTGGTGCGCTGGCAG
TTCTGCGACGAGTTCGACTTGGTGCCATCGGCACAGATCGTGGAGAAGGA
TCCGCAAATGCTGATTGACTATTTCCAGAAGATGGCACCTTACTCCCGTC
ACATTGCGATGCGAATGAAGGGCGTGCCGGAGGAGCTGCGTTTGGCGGCC
TCGCGCACCAGTTATCCGCACATTAGCAGTGCGCCCGTCGAAGTGCCGCC
GGAGGTGGATCAGTCCGCTGAGTTGGCTGGACATCTTGGTGGAATCGCGC
CACAGGTGGACCAGGCGCCGCAGCACCATGCACCCATGGATCTAGCCAAT
GATACCGACAATTTGGCTAGTGTTTCGTACTCGATTCCCGTGCCCGGCGT
TGGCGACATTGCCATCGATGTGCCCATGGC
MXO02831.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:34:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6990-PA | 714 | HP1c-RA | 30..701 | 59..730 | 3335 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HP1c-RA | 986 | CG6990-RA | 98..798 | 30..730 | 3385 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22745717..22746417 | 30..730 | 3385 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:00:02 has no hits.
MXO02831.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:33 Download gff for
MXO02831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6990-PA | 1..701 | 30..730 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:43 Download gff for
MXO02831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HP1c-RA | 81..790 | 22..730 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:29 Download gff for
MXO02831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HP1c-RA | 89..798 | 22..730 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:29 Download gff for
MXO02831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22745708..22746417 | 22..730 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:43 Download gff for
MXO02831.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18571430..18572139 | 22..730 | 98 | | Plus |