MXO02832.5prime Sequence
855 bp (773 high quality bases) assembled on 2007-04-17
> MXO02832.5prime
CAGTCGACATGCGTCCGTTGATGCCCCTGGAGGGCGAGCGTTCCATAACG
CAAATCAAGTACAACCGCGAGGGCGACCTGCTCTTCTCCTGCTCCAAGGA
TCAGAAGCCCAATGTGTGGTACTCGCTGAACGGAGAACGTTTGGGCACCT
ACGATGGTCACCAGGGTGCGGTCTGGTGCCTGGATGTGGACTGGGAGAGC
CGTAAGCTCATCACCGGCGCCGGTGATATGACCGCTAAGATCTGGGACGT
CGAGTACGGCACCGTTATCGCCTCCATTCCGACCAAGTCATCGGTGCGCA
CCAGCAACTTCAGCTTCTCGGGCAACCAGGCAGCCTACTCAACGGACAAA
GCGATGGGACAGAGCTGTGAACTGTTCCTCATCGATGTCCGCAACGCCGA
TTCCTCGTTGTCGGAGCAGGAGCCCACACTCCGCATCCCGATGACCGAGT
CCAAAATTACGTCGATGTTGTGGGGTCCTCTGGATGAGACCATCATCACA
GGTCACGATAATGGCAACATTGCCATCTGGGACATCCGTAAGGGTCAAAA
GGTGGTTNGACTCTGGCACGGATCACAGCNGCTGGCATCAACGACATGCA
GTTGAGCAAGGATGGCACCATGTTTGTGACCGCCTCCAAGGACACCACCG
CCAAATTGTTCGATTCGGAGTCCCTGATGTGCCTCAAGACCTACAAAACG
GAGCGTCCAGTAAACTCGGCGGCCATCAGCCCAATCATGGATCATGTCGT
GCTGGGCGGCGGTCAAGATGCCATGGAGGTGACCACTACGTCTACGAAGG
CTGGCAAGTTTGACTCGCGCTTCTTCCACCTGATATACGAGGAGGAGTTC
GCCCG
MXO02832.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8882-PA | 981 | Trip1-RA | 27..845 | 35..855 | 4025 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trip1-RA | 1177 | CG8882-RA | 83..927 | 9..855 | 4080 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4967022..4967514 | 503..11 | 2360 | 98.6 | Minus |
| 2L | 23513712 | 2L | 4966617..4966971 | 855..499 | 1685 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:51 has no hits.
MXO02832.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:33 Download gff for
MXO02832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8882-PA | 1..845 | 9..855 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:53 Download gff for
MXO02832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trip1-RA | 83..927 | 9..855 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:23 Download gff for
MXO02832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trip1-RA | 83..927 | 9..855 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:23 Download gff for
MXO02832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4966617..4966968 | 502..855 | 99 | <- | Minus |
| 2L | 4967024..4967514 | 11..501 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:53 Download gff for
MXO02832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4966617..4966968 | 502..855 | 99 | <- | Minus |
| arm_2L | 4967024..4967514 | 11..501 | 98 | | Minus |
