MXO02835.5prime Sequence
879 bp (801 high quality bases) assembled on 2007-04-17
> MXO02835.5prime
CAGTCGAAATGANAGGNAAACTTCTACTGGGAAGGATCCTGTGCCTAATG
GGCGGCCAAGCCTTGGGCGATGCGATTCTGGAAGGAAACTACAACGTTAC
GGCCGTCTGCACGGCGGTTAAGGTCGGAACGCAGCTGGGCAGCATCGAAT
CCTGCCAGACGTACTACGTCTGCCAGTCCACCGGACCCGTGCAGTCCTCG
TGCCAATCAGGCTACTCGTACGACTACAAGAGATCCTCCTGCTATCCAAG
CAGCGAGGTGGACTGCTATTGGGGCGTTGAGAATCCCTGTGCTGGCAAGA
ATAACACCTGGGTGCCAAACACTGCCGTTTGTGGTGGATGGTTCTACTGC
CTTGAGGGCAAGTCGGCGGGCTCCGGATTTTGCCCGGTGAACCAGAAATT
CGATACCACCACACTCGCCTGCGTTTATGGAACCTGCTCCAACACTCAAG
GTACTAATGAAACCGTGCTAGAATCACTATGCGATGTCGTGCCACCTGGC
CAATATTTCGGCGATACTGAGAGCTGCTCCACCTGGCACTACTGCGAGTC
CACCTCCACCGGACTCGTTTTGCAGTCGGGTAAATGCTCTGCAAACAATC
AAACTGCATACAACGTGCTCGCCAATCAATGTACCTACGAAAGTGCCTCC
GTCTGCAGCCGTGTGACCAACATTCCGCTGAGCGATGCCGCAGTTTCCTG
CTCCACGAACGGTGCCAAGTCAGCCGATCCCAAGGTGTGTGGCACCTATT
ATGTGTGCACGAACGGCAAAAATGTGGCCACCTACTGCCCCACTGGCGAC
TACTACGACGACAGTTTAGGGTACTGTGTGTCCCGCCAGGTCGCCACTCC
GGTGGGCGGATGCAATCGATGCCAGTATG
MXO02835.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7298-PA | 1110 | CG7298-RA | 373..871 | 381..879 | 2445 | 99.5 | Plus |
| CG7298-PA | 1110 | CG7298-RA | 27..369 | 35..377 | 1715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7298-RA | 1323 | CG7298-RA | 86..956 | 9..879 | 4213 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20202913..20203505 | 606..14 | 2864 | 98.8 | Minus |
| 3L | 28110227 | 3L | 20202437..20202710 | 879..606 | 1340 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:22:34 has no hits.
MXO02835.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:34 Download gff for
MXO02835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7298-PA | 1..871 | 9..879 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:30 Download gff for
MXO02835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7298-RA | 84..956 | 5..879 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:37 Download gff for
MXO02835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7298-RA | 84..956 | 5..879 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:37 Download gff for
MXO02835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20202437..20202710 | 606..879 | 99 | <- | Minus |
| 3L | 20202914..20203508 | 10..605 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:30 Download gff for
MXO02835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20195537..20195810 | 606..879 | 99 | <- | Minus |
| arm_3L | 20196014..20196608 | 10..605 | 98 | | Minus |
