MXO02836.5prime Sequence
789 bp (788 high quality bases) assembled on 2007-04-17
> MXO02836.5prime
CAGTCGACATGAGGCATCTGATGTTCCTAATGCTGATGGTCCTGCCCATC
GTCATCTGCACCTTCTCGGCGCCCAACAAGTTTGGAGCCTATGCCGCCGA
GGCCGTGGAGGACGACCTGGTGGACGTGGAGGGCGAGGAGGGTGCCGTTA
CTGGCGAGGATGCAGAAGCGGACGAGGATAGCGACACGGGCAGCAGCAGT
TCGCCGAATGCGGACACCTATCTGTTATTCACGAAACCCCTGTACACACC
TGGCCAGCAGCTGGATCTGCCCGGCGGCAAACCCGTCGAGTTCCTGATTG
GATTCACCAACAAGGGAGCCGAGGAATTCGTGATCGAGACGGTGGAGGCC
TCCTTCCGCTATCCCATGGACTTCAACTACTTCATCCAGAACTTCTCGGC
GGTGGCCTACAATCGTGAGGTGAAGCCCGGCTTTGAGTCGACCGTGTCGT
ACACCTTCCTGCCCTCGGATCAGTTTGCCGGCCGTCCATTTGGACTGAAC
ATTGCACTGGCCTACCGCGATGCCAATGGTATTCAGTACAACGAGGCCGT
GTTCAATGAGACCGTTCTGATTTCGGAGGTCGATGAGGGTCTGGATGGCG
AGACTTTCTTCCTGTACGTCCTGCTGGCGGGCATTGTGGTCCTGCTACTG
GTCATCGGACAGCAATATCTGCTCGGCAGCTCTGGCAAGAGGAAGCGTGC
CGCTGCCAAGAAGGTGATCGAAACCGGCACGGCCAACGACAGCACCATCG
ACTACGATTGGGTGCCACAGGAGACGCTGCGTGCGCTGC
MXO02836.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32701-PA | 909 | l(1)G0320-RA | 1..781 | 9..789 | 3905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0320-RB | 1854 | CG32701-RB | 147..927 | 9..789 | 3905 | 100 | Plus |
| l(1)G0320-RA | 1309 | CG32701-RA | 236..1016 | 9..789 | 3905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9552067..9552783 | 789..73 | 3585 | 100 | Minus |
| X | 23542271 | X | 9553452..9553515 | 72..9 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:29:08 has no hits.
MXO02836.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:35 Download gff for
MXO02836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32701-PA | 1..781 | 9..789 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:32 Download gff for
MXO02836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0320-RA | 140..927 | 1..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:15 Download gff for
MXO02836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0320-RA | 229..1016 | 1..789 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:15 Download gff for
MXO02836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9552067..9552783 | 73..789 | 100 | <- | Minus |
| X | 9553452..9553522 | 1..72 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:32 Download gff for
MXO02836.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9446100..9446816 | 73..789 | 100 | <- | Minus |
| arm_X | 9447485..9447555 | 1..72 | 94 | | Minus |
