MXO02838.5prime Sequence
576 bp (576 high quality bases) assembled on 2007-04-17
> MXO02838.5prime
CTCCTTAAAGGAACTTATCAGTCGACATGTTCCCAGTGCTGCCCCTCCGG
GGCTTCTTCTTCGCCAAGGAAACCCACCAGATCAATGTGGACTGCAACGA
GCTCCAGATGATGGGCCAGTTCATGTGCCCCGACCCGGCGAGGGGTCAAA
TCGATCCCAAGACACAGCAGCTGGCCGGATGCACCAGGGAGGGTCGCGCC
CGCGTCTGGTGCATCGCCGCCAACGAGATCAACTGCACGGAGACTGGCAA
TGCCACGTTCACCCGAGAAGTGCCCTGCAAGTGGACGAATGGCTATCACC
TGGACACCACACTGCTACTCTCTGTCTTTCTGGGCATGTTCGGCGTGGAT
AGATTCTATTTGGGCTATCCGGGCATCGGACTCCTCAAGTTCTGCACCCT
CGGCGGCATGTTCCTGGGCCAGCTGATTGACATCGTGCTGATAGCCCTGC
AGGTTGTGGGTCCGGCGGATGGCTCCGCCTATGTGATACCCTACTACGGA
GCCGGCATCCACATCGTGCGCAGCGACAACACCACGTACCGGCTGCCCAG
GGACGACTGGGCAAGCTTTCTAGACC
MXO02838.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:35:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10795-PA | 537 | CG10795-RA | 27..534 | 53..560 | 2540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10795-RA | 1100 | CG10795-RA | 229..763 | 26..560 | 2585 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21383564..21383837 | 560..287 | 1370 | 100 | Minus |
| 2R | 25286936 | 2R | 21383902..21384163 | 287..26 | 1220 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:36:08 has no hits.
MXO02838.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:36 Download gff for
MXO02838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10795-PA | 1..537 | 27..563 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:40 Download gff for
MXO02838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10795-RA | 225..771 | 19..568 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:37 Download gff for
MXO02838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10795-RA | 225..771 | 19..568 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:37 Download gff for
MXO02838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21383556..21383837 | 287..568 | 98 | <- | Minus |
| 2R | 21383903..21384167 | 19..286 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:40 Download gff for
MXO02838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17271061..17271342 | 287..568 | 98 | <- | Minus |
| arm_2R | 17271408..17271672 | 19..286 | 96 | | Minus |
