MXO02840.5prime Sequence
897 bp (762 high quality bases) assembled on 2007-04-17
> MXO02840.5prime
CAGTCGACATGCTGAGAAGGATGACCCCTTTTAGTGGTCAAAAGCTGGCG
GCTGTGGTCAAGGAGCTGGAGAACTTTGCTCCGACTTCTTGGGCAGAGAA
GTGGGACAATGTGGGACTCCTGATCGAACCGCACCGCGAAAAACAAATCA
AGAAAATACTATTAACTAACGATTTAACCGAGCCCGTAGTGAAAGAAGCG
CTAGAGAAGGAGGCGGAGCTCATAATCAGCTATCATCCGCCAATTTTCAA
GCCCCTGACCAGGATTACGCAGTCACATTGGAAGGAGCGCGTGGTGGCAG
CATGCTTGGCCAACGATATAGCCTTGTACTCGCCCCACACGGCGTGGGAT
AAGAAGAGTGGTGGCGTCAACGACTGGCTATCTAAGGCAGTGAATATCAT
CAGCATCCGCCCTCTGGAACCGGAGTTGGGTGCTCCTCCGGGTACCGGAT
CCGGTAGATATATAGAAACCAAAATGGAGCTTTCCCAGGTGGTGGAGTCT
CTGCAAAAGCGCATTAGAAACAGCGTGCACGTTGCTCTAGCTGTGGGCCA
CACCCCCAAGACACTCATCCAATCCGTCGGCATTTGTGCCGGCTCTGGAG
CATCTCTGCTGAAGGGTATCCAAGCGGATCTTATCATTACCGGCGAAATG
TCCCATCACGAAGTTCTGGAGTTTACTCACAACAATACCACCGTTCTTCT
CTGCAATCATAGTAATTCAGAAAGGGGTTTTCTCCATGAGTTTTGCCCTA
TATTGGCCAAATCTTTTAATGAAGAATGCCTGGTATTTGTATCTGAAGTG
GACAAGGATCCTCTGGTCACCGTGGCTAGCGATATAAACAAAGAACTAAG
CGCATTTGTTGACGTCTACAAGAGCACATCAAAAGCAAGCTTTCTAG
MXO02840.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:36:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4278-PA | 879 | CG4278-RA | 1..876 | 9..884 | 4305 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4278-RA | 1063 | CG4278-RA | 89..964 | 9..884 | 4335 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16327157..16328032 | 9..884 | 4335 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:32:38 has no hits.
MXO02840.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:37 Download gff for
MXO02840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4278-PA | 1..879 | 9..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:45 Download gff for
MXO02840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4278-RA | 83..971 | 1..893 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:17 Download gff for
MXO02840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4278-RA | 83..971 | 1..893 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:17 Download gff for
MXO02840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16327151..16328039 | 1..893 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:45 Download gff for
MXO02840.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16327151..16328039 | 1..893 | 98 | | Plus |
