MXO02844.5prime Sequence
940 bp (853 high quality bases) assembled on 2007-04-17
> MXO02844.5prime
CTCCTAAAAGGAACTTATCAGTCGACATGAGTAATCTGGCGACCCTACGG
GGGCATGGTAACGAACCTGGGGCTCTTTCCCAGTCAAAGGACGATGTGGA
CCAGGACCACTCCTACAATAGGCAGCCGGTACAAAGCTACGAGGAAGGGA
CATCTTCGGCCGACGAACTGGAAGAAAGTGAATCCCATGACGAACCCAGT
ATTCCCAAACCCACCGATCAGTCCAGAAGACGCAGTATTTCAACTTCTAG
GCCGAGTTCAAGGCAGGAGCAGCACAATTCTATCAATGAACATCACAACG
GCATCGGTATTAAACTAGCGCTTGCCGGTGTTCTATTTGGTTTATTGGTT
GTCTATGGGTACGGATCCAGCATTATAGAGGAGAAACAGTGTGACTTTAA
GGATCTCAGGACAAAGTATCCCCAGCAGCAGGAAAAAGTATGGAGAGCCC
TGCAAAAGGGGATCGAGGGGCTGATTAACAAAAAGGACAAGCACCCCAGT
GTATTTTTGTTCCTGCACCAGGATCCAAAGCTGGAGAAACTGATCGATGA
AATTGCCATTGAGGCTTCAATGTGCTTTGGTGGTCCCCGAAAGCTGATTC
ACATGAAGAAGGAGCACATGAAGGAATACGGTTTGGCGATTGAACAATTC
AAATCAAAAATCAACGATGGAAAGGTTTTTTTAATAGTGAACCTAAATGA
AATTGCGCCGAATGGAGCTCGAGCCCTGCACACAATCTGCGATACCTACA
GCCCTCTGGTGGAGGATGCAGTCATCTTCCTCTCCCTTCGAACATTCAAC
ACAACCGCCGTGAACAACTCCGTCAATCTAGCCACGGATACTCTGTACGA
TCTGTGGGACCAGGAGTTGGGGGACCACGAGCTGGATCCTTTAATTACTC
GAGTTACTGATCAGGTGCTCCATTTGAGTGCAAGCTTTCT
MXO02844.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:36:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14103-PA | 906 | CG14103-RA | 27..903 | 53..929 | 4385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14103-RB | 1221 | CG14103-RB | 52..954 | 27..929 | 4410 | 99.2 | Plus |
| CG14103-RA | 1036 | CG14103-RA | 52..954 | 27..929 | 4410 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19804475..19805029 | 581..27 | 2670 | 98.7 | Minus |
| 3L | 28110227 | 3L | 19804005..19804232 | 929..702 | 1140 | 100 | Minus |
| 3L | 28110227 | 3L | 19804288..19804410 | 701..579 | 615 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 8307..8346 | 150..189 | 110 | 75 | Plus |
MXO02844.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:38 Download gff for
MXO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14103-PA | 1..906 | 27..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:50 Download gff for
MXO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14103-RA | 52..960 | 27..936 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:50 Download gff for
MXO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14103-RA | 52..960 | 27..936 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:50 Download gff for
MXO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19803999..19804232 | 702..936 | 98 | <- | Minus |
| 3L | 19804288..19804409 | 580..701 | 100 | <- | Minus |
| 3L | 19804477..19805024 | 29..579 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:50 Download gff for
MXO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19797099..19797332 | 702..936 | 98 | <- | Minus |
| arm_3L | 19797388..19797509 | 580..701 | 100 | <- | Minus |
| arm_3L | 19797577..19798124 | 29..579 | 98 | <- | Minus |
