MXO02845.5prime Sequence
871 bp (834 high quality bases) assembled on 2007-04-17
> MXO02845.5prime
CAGTCGACATGTCCGAGCGAAAGGTCTTAAACAAATACTATCCCCCGGAC
TTCGATCCATCGAAGATTCCGCGCATGAAACTGGCCAAAAACCGGCAGTA
CACCGTGAGATTGATGGCTCCATTTAATATGCGCTGCAAAACGTGTGGGG
AATACATATACAAGGGCAAGAAATTCAACGCTCGCAAGGAGGACGTGGAG
AACGAAACGTACCTGGGCATCAGGATCTATCGGTTCTACATCAAGTGCAC
GCGCTGCCTGCAGGAGATCTCCTTCAAGACAGATCCACAGAACACGGACT
ACGAGATTGAGGCGGGGGCCACCAGGAATTTCATGGCACTCAAGTTGGCC
GAGGAACAGGCACGTCGCGAGGAGCAGGAATTGCGCGATGAGGAGGCCAA
CAATCCGATGAAGCTGCTCGAGAATCGCACCCAACAGTCGCGCAACGAGA
TCGAAACGATCGAGAGCCTGGAGGAGTTGCGTGATCTCAACCGGCGTCAG
CAGACAGTGGACTACAACACTCTGCTGCAGCAGTACAACACGGTGGAGAC
GGAGAGAGAGCGCCAGGAGCGGGAGGAGCGCGAAGACGAGGATTTTATTA
AGTCCGTAAACTTTAAGAACAAGCCAGAAGGAAGCTCTCGTGTTGTCGCT
GAGGAAATCATTGAGGAGATCAAGGATGAACCGTTGGACACACCGTCAGC
TCCTCCACCAGCCAAACAGGCCAAGCCCAGCACGATCAGTCTTTCCGCCA
CATCCTCCAGCAAAGCATCCGCAGCGCAGTCAATGGTTAAAAGGAAGACA
CCATTGGTGCTGGTCAAGCCCAAGGCAACCGCAGTAGCAAAGCCCACGGT
AGCCACTGGAACGACGCAAGT
MXO02845.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:36:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8435-PA | 1002 | CG8435-RA | 1..863 | 9..871 | 4315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8435-RA | 1148 | CG8435-RA | 79..941 | 9..871 | 4315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16170135..16170705 | 603..33 | 2855 | 100 | Minus |
| 2R | 25286936 | 2R | 16169807..16170080 | 871..598 | 1355 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:56 has no hits.
MXO02845.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:38 Download gff for
MXO02845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8435-PA | 1..863 | 9..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:56 Download gff for
MXO02845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8435-RA | 72..941 | 1..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:26 Download gff for
MXO02845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8435-RA | 72..941 | 1..871 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:26 Download gff for
MXO02845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16169807..16170076 | 602..871 | 100 | <- | Minus |
| 2R | 16170137..16170705 | 33..601 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:56 Download gff for
MXO02845.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12057312..12057581 | 602..871 | 100 | <- | Minus |
| arm_2R | 12057642..12058210 | 33..601 | 100 | <- | Minus |
