MXO02848.5prime Sequence
678 bp (678 high quality bases) assembled on 2007-05-15
> MXO02848.5prime
CAGTCGACATGTCGCTTTTAGGTACGATTGCAGAGAAAACTTCAAGGCTC
AGCTGCCTTCGATTGATGTCGGTGTATCCCACACACTATGTCGAACCAAT
TGTACAAAAATATAAACAACTAGAGCAAAAGAATGATCTGTCCAAGCTTT
ACCATGTGCCCATCAAGGCGGCGGTCAACAAATCGTCTGATACCATCTTT
CACGACGATACAAAACATAAAATGATCAATTATATAACGAAAAAGGGGAA
CAGTGCCTTGGCCAGAACGCTTTTGTCCAAGACGCTGGAGCTAATAAAAC
GAACCCAGACGGAGCACATGAATCTGGCCAAAGGGGAGAAGACAACCATA
AACACCAATCCCGAAACGCTTCTGAAACAAGCGGTTGAAAACTGCCGACC
GCTCCTTCAAGTGACCGCCATAAAACGTGGTGGTGTCACCTATCAAGTCC
CTGTTCCCATCACCACGAAGCGGTCATATTTTCTGGCCATGAAGTGGCTC
TTGGAAGCTGCCCGCGAGAAGGAGCGTAAGGTGTCCCTGCCGGAAAAGTT
GGCCTGGGAGATTCTCGACGCAGCCCATGGCCAGGGAAGGGTCATCAAGC
GAAAGGACGATCTGCACAGGCTGTGCGAAAGCAACCGCGCCTACGCACAT
TACCGATGGAGCGCAAGCTTTCTAGACC
MXO02848.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:12:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5108-PA | 657 | mRpS7-RA | 1..654 | 9..662 | 3245 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS7-RB | 917 | CG5108-RB | 81..736 | 7..662 | 3265 | 99.8 | Plus |
| mRpS7-RA | 789 | CG5108-RA | 81..736 | 7..662 | 3265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10386860..10387471 | 51..662 | 3060 | 100 | Plus |
| 2L | 23513712 | 2L | 10386742..10386787 | 7..52 | 215 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:11:20 has no hits.
MXO02848.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:12:50 Download gff for
MXO02848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5108-PA | 1..657 | 9..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:58:23 Download gff for
MXO02848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS7-RA | 73..739 | 1..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:39 Download gff for
MXO02848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS7-RA | 73..739 | 1..666 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:39 Download gff for
MXO02848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10386862..10387474 | 53..666 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:58:23 Download gff for
MXO02848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10386862..10387474 | 53..666 | 99 | | Plus |
