MXO02856.5prime Sequence
856 bp (804 high quality bases) assembled on 2007-04-17
> MXO02856.5prime
CAGTCGACATGAAACTGATCACTGTGACTTTGGTTATTGCCCTTGTGGCC
GCCGCCCAGGGAGCCAAGCTCTCCGACAAGCTGGCCAAACTCGTGCCTAG
CTTTGCGACCGGCTTCGTGATCAACGGCACGGAGGCAGAACCCCACTCCG
CCCCGTACATTGTTTCCCTGGCGACCAACTACTTGAAGCACTCGCACATC
TGCGGAGGCACCTTGATTAACAAGGACTGGATTGTGACTGCTGCTCATTG
CATTTCCGAGCCAGTAGGCATGAGCATCATTGCCGGACTCCACACCCGTG
CCGAGGTGGATGAGCTGACCCAGCAGCGCCAAGTTGACTTTGGCCGCGTC
CACGAGAAGTACACCGGTGGCGTTGGTCCCTACGACATTGCCCTGCTGCA
CGTGAACGAGTCTTTCATCTTCAACGAGTGGGTGCAGCCCGCCACCTTGC
CCAGCCGTGAACAAGTCCATGAGGGAGAGACCCACCTGTACGGTTGGGGA
CAGCCAAAGTCCTACATCTTCTCGGGCGCCAAGACCCTGCAGACTGTGAC
CACCCAAATTTTNGAACTACGAGGAGTGCAAGGAGGAGCTGCCGGAAAGC
GCTCCTATCGCTGAGTCCAACATCTGCTCCTCTTCCCTGCAACAGAGCAA
GTCTGCATGCAACGGTGACTCCGGCGGCCCCCTGGTTGTTGAGTTCACAA
ACGCCCCCTCCGAGCTGATTGGCATCGTATCCTGGGGCTACATCCCCTGC
GGACTGGCCAACATGCCTTCCATTTACACCAAGGTGTCGGCCTACATTGA
TTGGATAACCAATATTCAGAGTGCCTACTACAAGCTCTTCGCAAGCTTTC
TAGACC
MXO02856.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:37:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11911-PA | 834 | CG11911-RA | 1..831 | 9..840 | 4095 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11911-RA | 970 | CG11911-RA | 28..858 | 9..840 | 4120 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 320391..321221 | 840..9 | 4095 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:29:15 has no hits.
MXO02856.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:40 Download gff for
MXO02856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-PA | 1..834 | 9..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:34 Download gff for
MXO02856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 21..861 | 1..844 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:19 Download gff for
MXO02856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 21..861 | 1..844 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:19 Download gff for
MXO02856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 320387..321225 | 1..844 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:34 Download gff for
MXO02856.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 320387..321225 | 1..844 | 99 | | Minus |
