MXO02859.5prime Sequence
558 bp (558 high quality bases) assembled on 2007-05-15
> MXO02859.5prime
CAGTCGACATGACTGAGAGCATTGCGTGTCACAAGTGCCAGGAGGCCATC
ACCAAGCGTATGATCACCGCCCTGGGCAAGACGTGGCACCCGGAGCACTT
CCTGTGCCACCACTGCGATGAGCAGATCCTGGATGCCACCTTCAATGTTC
AGAGCGGAGAACCAGTGTGCAACAAGTGCTTCGTGGAGCGGTACACCTAC
ACCTGTGCCGGCTGCAAGAAGCCGATCCTTGAAAAAACCATCTGCGCCAT
GGGGGAGAGCTGGCACGAAGATTGCTTTTGCTGCGGCGGTGCCTGCAAAA
AGCCGCTCGCCAATCAAACGTTCTATGAGCGCGACGGCAAGCCCTATTGC
AAAAAGGATTACGAGGACCTCTTTGCTGTTTGGTGCGCCCAGTGCGAGAA
GCCTATAACGGACTCAGCGGTGCTCGCCATGAACGTGAAGTGGCATCGCG
ATTGCTTCCGGTGCAACAAGTGCGAGAATCCTATAACCTCGCAGACTTTC
ACCATCGACGGGGACAAGCCCGTGTGCCCCGCCTGCAATTGCGCAAGCTT
TCTAGACC
MXO02859.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31988-PA | 537 | CG31988-RA | 1..370 | 9..378 | 1825 | 99.7 | Plus |
CG31624-PA | 537 | CG31624-RA | 1..370 | 9..378 | 1675 | 98.1 | Plus |
CG31988-PA | 537 | CG31988-RA | 374..534 | 382..542 | 780 | 99.3 | Plus |
CG31624-PA | 537 | CG31624-RA | 374..534 | 382..542 | 680 | 96.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31988-RB | 1149 | CG31988-RB | 390..923 | 9..542 | 2595 | 99.1 | Plus |
CG31988-RA | 1014 | CG31988-RA | 297..830 | 9..542 | 2595 | 99.1 | Plus |
CG31624-RC | 979 | CG31624-RC | 87..620 | 9..542 | 2445 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21201719..21202252 | 542..9 | 2595 | 99.1 | Minus |
2L | 23513712 | 2L | 21199404..21199937 | 542..9 | 2445 | 97.2 | Minus |
2L | 23513712 | 2L | 19404347..19404402 | 116..61 | 190 | 89.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:41:26 has no hits.
MXO02859.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:09 Download gff for
MXO02859.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31988-PA | 1..537 | 9..546 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:14 Download gff for
MXO02859.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31988-RA | 289..833 | 1..546 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:03 Download gff for
MXO02859.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31988-RA | 289..833 | 1..546 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:03 Download gff for
MXO02859.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21201716..21202259 | 1..546 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:14 Download gff for
MXO02859.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21201716..21202259 | 1..546 | 97 | | Minus |