MXO02861.5prime Sequence
897 bp (769 high quality bases) assembled on 2007-04-17
> MXO02861.5prime
CAGTCGACATGACTGAAAAAATAAGGAGGAGCAGGAATCAGGATGTCCAG
GATACAGCGATCAAGATTACTCCACGCAGCTCCAAGTACAAAAACCAGCA
CAGGAAACGGGAGCAGCAAACCTCTCTTCTGGACTTTGTCATCAAGCCGA
GACCAAAAACACAAAGGCAAACAAAGGCACATAAACTTCAAAAGACACAT
TTAGCCATAACAAGAGGTAGCTACATAGTTTACAAACCCAAGGGCAAAAC
CCGCCTTGATCCCAAGAAGAAGATCACCAGGTTGAAGAAGTCCGTACGTG
TATATCGCACTTCAAAGAAGGCGGAGAGAGAAGTCGCAGAGAATGATCTT
GAAGGAGTCCCAGTAGTTGGTCAAGATATCAATCCGAATGCTATTCCGCT
GGAGCAACAAGTTCAAAACCTATCACTTAGTAAAACCCCTGCACCCAACA
ACCCTTCACAAGCAAAAACAGTACATGCCATTCACTCACGGCGATTTAGA
AGCTATTGTGACAACTGCACCCGTCCTCGCCTCAAGGAGTTGTCCACTCA
GTTGTTAAGGGACCTGGATCGATTTCAGAAGCGCGCCTTTGCCAAAAACG
AGATTAAAGCGCGTGCACATCCCCGCCTGGTTTTGGGTGTTCGAGAAGCT
CTGGCGAGGCTAAGGATAAACAAGGTGAAATTGTTGTTCCTGGCCACTGA
CTGCGAAATCTGCCCCGGCGAAAGTGGTCTAGATGCGACTATAGAAGGCT
TGAAATTCCAATGCCAGCAGCAACAAGTGCCCTATTGCTTTCCTCTGCTG
AGAAGGGAGCTTTCTTATGCCCTCCAAAAGCGAGCGCAAATTTGTTGCGT
TGCTATCCTTGACTTTGACGGAGCGAATGCAACCTACGCAGATCTTC
MXO02861.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:37:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7066-PA | 942 | CG7066-RA | 1..889 | 9..897 | 4445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:54:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sbp2-RA | 1055 | CG7066-RA | 37..925 | 9..897 | 4445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:54:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8304193..8304686 | 9..502 | 2470 | 100 | Plus |
| 3L | 28110227 | 3L | 8304746..8304971 | 501..726 | 1130 | 100 | Plus |
| 3L | 28110227 | 3L | 8305022..8305195 | 724..897 | 870 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:54:21 has no hits.
MXO02861.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:41 Download gff for
MXO02861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7066-PA | 1..889 | 9..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:09 Download gff for
MXO02861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sbp2-RA | 31..925 | 1..897 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:37 Download gff for
MXO02861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sbp2-RA | 31..925 | 1..897 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:37 Download gff for
MXO02861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8304187..8304686 | 1..502 | 99 | -> | Plus |
| 3L | 8304748..8304968 | 503..723 | 100 | -> | Plus |
| 3L | 8305022..8305195 | 724..897 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:09 Download gff for
MXO02861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8297287..8297786 | 1..502 | 99 | -> | Plus |
| arm_3L | 8297848..8298068 | 503..723 | 100 | -> | Plus |
| arm_3L | 8298122..8298295 | 724..897 | 100 | | Plus |
