MXO02862.5prime Sequence
751 bp (751 high quality bases) assembled on 2007-04-17
> MXO02862.5prime
CAGTCGACATGGCTAAAATCTTAATCAGTGCTCTATTGTGCGTTGCCATG
TTTGGCTCAATGGCTGCCGCCGCCGCCGGTGCATGCAAGGAGGCGAATGG
AACTGCTCCCGTGTCCGGATCCTGCGATGCCTACATTGAGTGCAAGAACG
GAGTGGCCGAGGAGAAGCTCTGCCCCGACGGTCTGCTGTACAACGAAAAG
TCCACGGGTTACCCCTGCGGCTATCCGATCGACGTGGAGTGCACCCAGGG
CCAGGCCCGCCTGCAGGCCGCTCAGCCAACGGATGAGTGCCCCCACCAGT
TCGGATACTATCGCATGGGTGATGCCAGCCATTGTGGACAGTTCATGAAC
TGCGCCGCGGGCCGTGGCTTCGTGTTTGACTGCCCCGAGGGTCTGGCCTG
GAATCCGGCCACCTACAAGTGCGATTGGCCCGATCAGGTGGAGGACTGTG
ACGCCGAGGCCTTCCTGGGCTTCCGCTGCCCAGCGCCGGCACCCAGATCT
GAGCTGCTCGGCGAGCAGGAGGCTGACTACACCTTCCACCCGTCGCAGGA
CAATTGCCANGGTGTACTTCATCTGTATCGAGGGACGTCCGCGTCGCATT
GGCTGCGGCGAGGACCAGGCTTTCAACCAGGAGCTGAACCAGTGCGACGA
CATCGAGAACGTGCCCAACTGCAGCAGTGCCATCCGTGAAAAGGGTGCCC
AAATCAAGGCTGCTCGTCTTCACGCCAGGAAGAACGCAAGCTTTCTAGAC
C
MXO02862.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11142-PA | 729 | CG11142-RA | 1..726 | 9..735 | 3570 | 99.7 | Plus |
| CG11142-PB | 750 | CG11142-RB | 1..57 | 9..65 | 285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-E-RA | 994 | CG11142-RA | 128..853 | 9..735 | 3595 | 99.7 | Plus |
| obst-E-RB | 998 | CG11142-RB | 128..184 | 9..65 | 285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5763601..5764272 | 735..63 | 3300 | 99.7 | Minus |
| 2L | 23513712 | 2L | 5765961..5766015 | 63..9 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:34:48 has no hits.
MXO02862.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:41 Download gff for
MXO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11142-PA | 1..729 | 9..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:38 Download gff for
MXO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-E-RA | 128..857 | 9..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:09 Download gff for
MXO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-E-RA | 128..857 | 9..740 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:09 Download gff for
MXO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5763598..5764271 | 64..740 | 99 | <- | Minus |
| 2L | 5765961..5766015 | 9..63 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:38 Download gff for
MXO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5763598..5764271 | 64..740 | 99 | <- | Minus |
| arm_2L | 5765961..5766015 | 9..63 | 100 | | Minus |
