MXO02864.5prime Sequence
678 bp (678 high quality bases) assembled on 2007-05-15
> MXO02864.5prime
CAGTCGACATGTCGGATTCGCTGATCATTTGCGTTTCCGACTACTGGCGG
CGATGTCATTACCACAATCGTCAAAATCGTGAAGCCGGCGACGCCTGGCC
AGAAGCCAAACCGCTGCGGAGGCTGTGCATCGATGTGGACGCCATCAATG
GTAATTACTATCTTCGCGAGTTCCTGCACCAGCACGTGCTTGCCCAGAGC
CTTATGCACAATCATGGTGTCCAGCTGGTCTGGCTGCAATTCGAGGAACC
GGAGAAGCACACCATTGACTACAAATTCGCCGACATGCTGGCACACACGC
TGTGGGAGCGCATCGAGGTGGAGCACCTCATGTCCTGGCTGTCCACACTG
GGCGGCGGATTCTCCGCCCTTGGTTATTTTTTCCAGCGATGTGCGAAAAC
GGCTGGCAAGATTTCGCTGCAGCAGTTAAAGATTGGCATGCGACTCGGTG
ATCCCTTCCTGCAGACGCGCTGCAAGCTCTACTACAGCATTTCGCTAATC
CAGCGTGGTCAACTACGGATGGCGAAGCATTTGATCCGACAGCAGTATAA
GTTTGCGAGTAGAAACATCGAGAAGGATGTGCGCCTGATGCGGATGTGTC
TGGGCATTTGGCGGCGACTTAGCTACGAGTACGAGCAGCGAAGACTGCGG
AAAGGTGGCAACGCAAGCTTTCTAGACC
MXO02864.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12123-PA | 657 | CG12123-RA | 1..365 | 9..373 | 1825 | 100 | Plus |
| CG12123-PA | 657 | CG12123-RA | 377..654 | 385..662 | 1390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12123-RA | 1044 | CG12123-RA | 224..877 | 9..662 | 3165 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8441761..8442125 | 373..9 | 1825 | 100 | Minus |
| X | 23542271 | X | 8441414..8441683 | 662..393 | 1350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:41:28 has no hits.
MXO02864.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:18 Download gff for
MXO02864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12123-PA | 1..657 | 9..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:15 Download gff for
MXO02864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12123-RA | 222..883 | 5..670 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:04 Download gff for
MXO02864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12123-RA | 222..883 | 5..670 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:04 Download gff for
MXO02864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8441408..8441683 | 393..670 | 98 | <- | Minus |
| X | 8441742..8442127 | 5..392 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:15 Download gff for
MXO02864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8335441..8335716 | 393..670 | 98 | <- | Minus |
| arm_X | 8335775..8336160 | 5..392 | 97 | | Minus |
