MXO02865.5prime Sequence
645 bp (645 high quality bases) assembled on 2007-05-15
> MXO02865.5prime
CAGTCGACATGAATGTCCATGGTGAGCCGGTTGTGAACGATAAGAATTTG
ATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATGGGCATGCT
GACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGTAATGTCAG
CAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAGATGTCCTA
GTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCACTATCCCA
GCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCATACTGCAG
CTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGTTAAATGTT
CCTATCTTTGGCGTAGTAGAGAACTTTTTTTACCCCCCTTGTCAGAACTG
TAATCAACGATTGAAGTTTTTTAAAGACAGCCGTATAAGTTCTCTACCGC
GCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATAGCAACGAG
AGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTACTCTTATCT
ATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGAACAAAGAT
GTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAGACC
MXO02865.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-PA | 894 | CG3262-RA | 270..636 | 8..374 | 1835 | 100 | Plus |
CG3262-PB | 624 | CG3262-RB | 1..366 | 9..374 | 1830 | 100 | Plus |
CG3262-PA | 894 | CG3262-RA | 651..891 | 389..629 | 1180 | 99.5 | Plus |
CG3262-PB | 624 | CG3262-RB | 381..621 | 389..629 | 1180 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3262-RF | 900 | CG3262-RF | 258..879 | 8..629 | 2975 | 98.6 | Plus |
CG3262-RE | 7023 | CG3262-RE | 274..895 | 8..629 | 2975 | 98.6 | Plus |
CG3262-RD | 1013 | CG3262-RD | 274..895 | 8..629 | 2975 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22240239..22240860 | 8..629 | 2975 | 98.6 | Plus |
Blast to na_te.dros performed 2014-11-28 22:10:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib3 | 2883 | transib3 TRANSIB3 2883bp | 1498..1536 | 198..160 | 114 | 76.9 | Minus |
MXO02865.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:27 Download gff for
MXO02865.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-PA | 263..894 | 1..633 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:41 Download gff for
MXO02865.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 267..898 | 1..633 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:42 Download gff for
MXO02865.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3262-RD | 267..898 | 1..633 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:42 Download gff for
MXO02865.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22240232..22240863 | 1..633 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:41 Download gff for
MXO02865.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22240232..22240863 | 1..633 | 97 | | Plus |