Clone MXO02865 Report

Search the DGRC for MXO02865

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:28
Well:65
Vector:pMK33-CTAP-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02865.5prime Sequence

645 bp (645 high quality bases) assembled on 2007-05-15

> MXO02865.5prime
CAGTCGACATGAATGTCCATGGTGAGCCGGTTGTGAACGATAAGAATTTG
ATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATGGGCATGCT
GACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGTAATGTCAG
CAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAGATGTCCTA
GTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCACTATCCCA
GCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCATACTGCAG
CTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGTTAAATGTT
CCTATCTTTGGCGTAGTAGAGAACTTTTTTTACCCCCCTTGTCAGAACTG
TAATCAACGATTGAAGTTTTTTAAAGACAGCCGTATAAGTTCTCTACCGC
GCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATAGCAACGAG
AGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTACTCTTATCT
ATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGAACAAAGAT
GTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAGACC

MXO02865.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-PA 894 CG3262-RA 270..636 8..374 1835 100 Plus
CG3262-PB 624 CG3262-RB 1..366 9..374 1830 100 Plus
CG3262-PA 894 CG3262-RA 651..891 389..629 1180 99.5 Plus
CG3262-PB 624 CG3262-RB 381..621 389..629 1180 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG3262-RF 900 CG3262-RF 258..879 8..629 2975 98.6 Plus
CG3262-RE 7023 CG3262-RE 274..895 8..629 2975 98.6 Plus
CG3262-RD 1013 CG3262-RD 274..895 8..629 2975 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22240239..22240860 8..629 2975 98.6 Plus
Blast to na_te.dros performed 2014-11-28 22:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
transib3 2883 transib3 TRANSIB3 2883bp 1498..1536 198..160 114 76.9 Minus

MXO02865.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:27 Download gff for MXO02865.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-PA 263..894 1..633 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:41 Download gff for MXO02865.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 267..898 1..633 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:42 Download gff for MXO02865.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3262-RD 267..898 1..633 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:42 Download gff for MXO02865.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 22240232..22240863 1..633 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:41 Download gff for MXO02865.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22240232..22240863 1..633 97   Plus