MXO02866.5prime Sequence
851 bp (726 high quality bases) assembled on 2007-05-15
> MXO02866.5prime
CAGTCGACATGCACCTGTCACACGGCCAACTGAAAGTGGTGCTCATTTTG
GCCCTGCTGCAGGAGCTGCAGGTGAAGCCGCAGCGAGAGGTGTTCCAGGA
ACTTTTCGAGAAGGATCTGCGCTTGTGTCCAGACTGTTTCGTTGGACAGA
GTGAGCCGTGCGGGGAAATCTTCCAGAAAATTGCAGAGCCCTCGGATTGG
AGTAGACTTGTGAAAGCCATTTCGTTGCTCGTTGATCGCCGAGCGATTTA
CTTTCTAAGGCTAAAAGACCGGGATCAGGAAGTCCAGCTGGTGGCCAAAA
GAAAAATCATTGATGCACAGAGTAATCAGATAAAAAATGTGAAAAAAGAT
TTCTATGAACTAGAGGAGCGACCTGTTTTTTTCCCCCCCTGCCGAACTCT
GGCAAGGGAACCCCGCTTTGTTTCGTACTTGGAGCAGCGTGGACATGCTG
CCGCCAGTGTGTGGTTCTACATGATGTACTACGTTAGTCCGCTGCTTATG
CAGGAACTGCATCTGCAGGGATTTCCAGTGCCTACCACCTACGCCTCCTG
CGGACTAACACATTTTCAATCCAATGCAGGACGTACTTTAGCTCATTACG
TCGATGCTGAAGAAGGTTTGCGTGTGGAGCTGGCTCTCCAGTTGATCCAG
CTCTCCCTCAAGCTGACTTTTGGATTCGCGGACTTTCGCATTATCTTAAC
CGATTTCACGGCCGATAATTTGGCTTACGACGAAGACACCAAGAAGGTGT
ACCTCATTGATTTGGACTCCGTGGTCCTGGTGGACGCTTCGTTCGCAGCA
AGACATGCCGAAAAGTACGAGCCGCTGACCGGCGAGGGATTCACATTTGA
T
MXO02866.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-PB | 1047 | CG11170-RB | 381..843 | 389..851 | 2290 | 99.7 | Plus |
| CG11170-PB | 1047 | CG11170-RB | 1..367 | 9..375 | 1835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-RD | 1106 | CG11170-RD | 38..880 | 9..851 | 4095 | 99.1 | Plus |
| CG11170-RC | 1135 | CG11170-RC | 67..909 | 9..851 | 4095 | 99.1 | Plus |
| CG11170-RB | 1195 | CG11170-RB | 127..969 | 9..851 | 4095 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22177645..22178487 | 851..9 | 4095 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:09:31 has no hits.
MXO02866.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:36 Download gff for
MXO02866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-PB | 1..843 | 9..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:08 Download gff for
MXO02866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 122..969 | 1..851 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:29 Download gff for
MXO02866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 122..969 | 1..851 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:29 Download gff for
MXO02866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22177645..22178492 | 1..851 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:08 Download gff for
MXO02866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18065150..18065997 | 1..851 | 98 | | Minus |
