MXO02871.5prime Sequence
837 bp (805 high quality bases) assembled on 2007-05-15
> MXO02871.5prime
CAGTCGACATGGAGAACGAACAGCCCATTGAGGTGAACCAGTGGCTAAAG
GAGCAGCGCATTATCCTGGATCTGAAAGCTCGTCGTTCATTCTCCGATGT
CTTGCCGGTGGCAAAGATTGTCAAGCGCAGTCATCCTCGTCTGGTGGATC
TGCACAACTATACGCCCAAGAGCAGCGTGGCCCTGAAACTCCAGAGCTGG
CAGACCTTCAATCAGAAGGTACTGAAGAAATTGGGCATCAATTTGACACG
TTCGGAGCTGGAGCAGCTGGCGTCAGCAGCGCCAGGAGCCATAGAATCAC
TGTTCCATGAACTAATCGCGGTGACCAAGTGCGCTAGTCCCAGACCAAGA
CCCCGTCTGAGTGTATCGCCAACGAGCTCCCAAAAGAGCGTGGTGATTAA
AAAGTTGGCTAACAAGAATTCTGTGGTACGCACTCTCAACCGATCCCTCA
CCCAAGTGATTGAGCGCTCCTGCTCGATCGATAGTCAACCCCAGGTGCTG
ACCATGGACGTGAATGTTGTGGTCAATGGACAGATGAAGAAGGTATCCAA
GAAAGTGGTCGAGTACGAACACTATGCCAATGCTATTAGGGAGAGTGCCG
AGAAGTCACGCTACATCAATTCCATTGCCGAGAGGGCCAATCACCTGGAG
AACACAATTGCCCTCAAGAATGAACGTATTGATGTGCTACTCCATCAAAT
GGCCAAACTATCCGTGAGCATTCTATCCATGCCACACACCCTCAACGGGA
CCGATGACGACACAGAGCTTCAATCCCGGTCTGACAACGCCGCCGAACCC
TGCTATGAATTCGGCACCTTTGCAAGCTTTCTAGACC
MXO02871.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16719-PA | 816 | CG16719-RA | 26..813 | 34..821 | 3940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16719-RA | 1080 | CG16719-RA | 85..897 | 9..821 | 3990 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9685255..9686067 | 9..821 | 3990 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:27:49 has no hits.
MXO02871.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:32 Download gff for
MXO02871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16719-PA | 1..816 | 9..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:34 Download gff for
MXO02871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16719-RA | 82..901 | 2..827 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:32 Download gff for
MXO02871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16719-RA | 82..901 | 2..827 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:32 Download gff for
MXO02871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9685252..9686071 | 2..827 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:34 Download gff for
MXO02871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9678352..9679171 | 2..827 | 98 | | Plus |
