MXO02874.5prime Sequence
891 bp (760 high quality bases) assembled on 2007-04-17
> MXO02874.5prime
CAGTCGACATGATGAACAAGAAGCTCTCGCCAGAGGATGCATTTTATGAA
AATTTGACCCTCGGTCTGATAAGGACGCTATCCAATGTGCCAAGGGTATG
TAATGTGACGTTGGAGCGACGACAACCTCTGAATGCCTGCCAGTTGGTGA
ATTGGGAGCAGAGGCACTGCGTCTACCTCCCGGAAGATATGAAGAAGTTC
TACCTATCTTCTGATGGCTTTATCTTAAACTGGAGCTACCAATATGCTCC
CAACGATATTAGGCGCGTGGGTCACATTCACTTTCCGCACTTGCTGCAAG
TGACCCTTTTGCGGGAGAACATAGAAACCACATCGAGCCACTCCAGCAAT
TCGACGGCTGTGCCCAATAGCAACTCGGATGTTGTGGGAGCAGCCGGGAG
CTCTCAATCCCTTCCAGCACCTATTGCCACCGGAAAAGACAAGTGGGGCA
ATGCCACGCCTATTATAACGGCCAAATCGAAAATATTTGAGATCAACAAC
GTAAACGAGGTGGCCAAGGTGTGTATGCTGTACGAATCTACCAGTTCCAA
CAATCCCAAGTTCTATCTGCTAGAGCTGAGCACCCTGAGCTGGCAGTTTT
TGGCGGACACCTTTAGTGAATACCTTCGGATGGCCATCGCGCACTTGGGA
CTGCCGTACTGGGAGCTGTGCTTCTCCACCTGTGGCCTGCCCTCTTGGAC
AGAGCAGCTGTTTCTTTTGCTAGCACCTCATCTTCTCGAGGAGCACGAGC
CACGACGTGGACGAGTACTGAATCCCGCTTGCGAGCATCCGTACAATATC
ATTGATCCGAACATTTTTCGGGGTAAACAAAAAGCGTGGCAAAGCAACGG
CTACCAGCACCAAACAAAATCATAAGCAAGCTTTCTAGACC
MXO02874.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:38:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6931-PA | 873 | CG6931-RA | 1..869 | 9..875 | 4265 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6931-RA | 1075 | CG6931-RA | 48..916 | 9..875 | 4295 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11991481..11991841 | 517..875 | 1705 | 99.4 | Plus |
| 3L | 28110227 | 3L | 11991142..11991417 | 250..525 | 1380 | 100 | Plus |
| 3L | 28110227 | 3L | 11990917..11991084 | 82..249 | 840 | 100 | Plus |
| 3L | 28110227 | 3L | 11990783..11990855 | 9..81 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:36:29 has no hits.
MXO02874.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:43 Download gff for
MXO02874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6931-PA | 1..873 | 9..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:53 Download gff for
MXO02874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6931-RA | 48..916 | 9..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:47 Download gff for
MXO02874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6931-RA | 48..916 | 9..875 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:47 Download gff for
MXO02874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11991142..11991410 | 250..518 | 100 | -> | Plus |
| 3L | 11991483..11991841 | 519..875 | 99 | | Plus |
| 3L | 11990917..11991084 | 82..249 | 100 | -> | Plus |
| 3L | 11990783..11990855 | 9..81 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:53 Download gff for
MXO02874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11983883..11983955 | 9..81 | 100 | -> | Plus |
| arm_3L | 11984017..11984184 | 82..249 | 100 | -> | Plus |
| arm_3L | 11984242..11984510 | 250..518 | 100 | -> | Plus |
| arm_3L | 11984583..11984941 | 519..875 | 99 | | Plus |
