Clone MXO02875 Report

Search the DGRC for MXO02875

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:28
Well:75
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG13130-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02875.5prime Sequence

372 bp (372 high quality bases) assembled on 2007-04-17

> MXO02875.5prime
CAATCGACATGATGATGATGATGATGGTTGCGACGATGAGAATGAGGATG
ATGATGATGATGATGGGGAACACAGGCAGCTGGGCCTGGGACCAGCTTTC
ATTGAAAGCATTTCCCTTTTTCGACACATTAATGAAATGTAAAATAATCT
GCCCGAATGGGCAAAAACTTTCATTACATGAGTTGGGCATGCCACTTTTG
TGGTTAACTCGGTGTATTAAAATAAAACTGATTTCAATCCCAGGACCATC
ACACTGGAATTCGCCAAGGGAAAATTATAGTTATGATATACTTGCTATAA
TAGTTAGTATATATAAAATTATACATATTTTATTCCCGAACATATCGATA
ATAAGAGCAAGCTTTCTAGACC

MXO02875.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:39:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG13130-PA 351 CG13130-RA 1..348 9..356 1640 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:54:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:54:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9983701..9984048 356..9 1680 98.9 Minus
Blast to na_te.dros performed 2014-11-28 21:54:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\Vege 884 Dwil\Vege VEGE 884bp Derived from AF518730. 622..708 358..271 112 62.9 Minus

MXO02875.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:43 Download gff for MXO02875.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13130-PA 1..351 9..360 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:15 Download gff for MXO02875.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13130-RA 451..806 1..360 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:43 Download gff for MXO02875.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9983698..9984053 1..360 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:43 Download gff for MXO02875.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9983698..9984053 1..360 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:15 Download gff for MXO02875.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9983698..9984053 1..360 97   Minus