MXO02876.5prime Sequence
866 bp (787 high quality bases) assembled on 2007-05-15
> MXO02876.5prime
CAGTCGACATGTTCGGATTGCTGCGACACCTGTTCAAATTTCAATTTCTT
TTCGTTGTGGCAGCCGTTCTGGGCGGAATTTATCACACAGAGATTAGGCA
GTTCCTGCGTCGCCAAACGGACAACTACCTGGACCAAGCTGGGCAGGATG
CGAGCATTCCCCTGGCGTTCCAAGCTGGTGACGATATCGGCACGCTCTTT
ACACCGGCCGAGTTGGCCAAATTCAATGGCGAGGAAGAGGGTCGTCCGCT
TTACCTGGCTCTACTCGGTTCCGTCTTCGATGTGAGCCGCGGCATTAAGC
ATTACGGATCCGGCTGCAGCTACAACTTCTTCGTGGGTCGCGACGCCTCC
GTATCCTTCATTTCCGGTGATTTTGATACTTACGATCCGGAAACGGCCGA
CGATGTGTTAACCCTAAAGCCGGACGACCTGATTGGTTTGGCCGGATGGC
GGGATTTCTATCAAAAGGACTACGTCTACAAGGGACGGGTAATTGGGCGC
TTCTACGATGAGAAGGGCGCCCTGACCACCTATCATCATAAGTTTCTGGA
GCTGCTGGAGCAGGCACGAGATGCCAAGCGACAGGTGGAGGAGCTGCGTG
CCCGGTATCCCGGCTGCAATATCGAGTGGAGCGAGGAGCGCGGCACTCGC
GTCTGGTGCACCACGACCAGTGGCGATGGCAAGGAGCGCTCCTGGATCGG
TTATCCGCGCAAGCTGTACAGTCGCGGCAACAAGAGTTTCCAGTGCGCCT
GTGTGCCGGATGCGGAGCTGGACGAGATCGATGCCGGCGGGCAGGTGGCT
CACGGTGATGCCATGCTGAAACCCTACGACAATTGCGAGCCACAGGCCAG
GGAGTGCTTCTACAGG
MXO02876.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12056-PA | 864 | CG12056-RA | 1..858 | 9..866 | 4190 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12056-RA | 952 | CG12056-RA | 24..881 | 9..866 | 4230 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9192692..9193549 | 9..866 | 4230 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:32:47 has no hits.
MXO02876.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:41 Download gff for
MXO02876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12056-PA | 1..858 | 9..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:17 Download gff for
MXO02876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12056-RA | 17..881 | 1..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:13 Download gff for
MXO02876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12056-RA | 17..881 | 1..866 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:13 Download gff for
MXO02876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9192685..9193549 | 1..866 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:17 Download gff for
MXO02876.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9086718..9087582 | 1..866 | 99 | | Plus |
