MXO02878.5prime Sequence
501 bp (501 high quality bases) assembled on 2007-05-15
> MXO02878.5prime
CAGTCGACATGGAGCACGAGTACTCCAGCGGTCTGTCGCTCGGTATCATG
GCCATCATTGCTGTCAAGAAGCTCGGCCCGGTCATCGCCAAGTGGGCTGA
TGGCGAGATCGATAAAATCGAATCTGAGTGGAAGGAGGGACGCGAGGCTG
AGCTGAAGGTCCTCTCCGACGCCATCGAGGCCGAGAAGAAGGAGCAGTGG
CGCGCCGACGGTGCCCTGCTGCTGATGGAAGCCAAGAAGGAGAACATTGC
ATTGCAGCTGGAGGCCGCGTTCCGTGAGCGCGCCATGAATGTGTACTCGG
AGGTGAAGCGTCGTCTCGACTACCAGGTGGAGTGCCGCCACGTCGAGCGT
CGCCTTAGCCAGAAGCACATGGTCTTTTGGATCACCACCAATGTGTTGGC
CAGCATCTCTCCCCAGCAGGAGAAGGAGACTCTCAACAAGTGCATCGCCG
ATCTGAGCGCTCTGGCACTGCGCGTCAAGTCTGCCGCAAGCTTTCTAGAC
C
MXO02878.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8189-PA | 732 | ATPsyn-b-RA | 252..618 | 8..374 | 1810 | 99.7 | Plus |
| CG8189-PB | 480 | ATPsyn-b-RB | 1..366 | 9..374 | 1805 | 99.7 | Plus |
| CG8189-PA | 732 | ATPsyn-b-RA | 622..729 | 378..485 | 540 | 100 | Plus |
| CG8189-PB | 480 | ATPsyn-b-RB | 370..477 | 378..485 | 540 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-b-RA | 918 | CG8189-RA | 321..798 | 8..485 | 2330 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9730733..9731104 | 114..485 | 1815 | 99.2 | Plus |
| 3L | 28110227 | 3L | 9730535..9730640 | 8..113 | 515 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:34:39 has no hits.
MXO02878.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:13:59 Download gff for
MXO02878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8189-PA | 246..732 | 1..489 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:29:17 Download gff for
MXO02878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-b-RA | 315..801 | 1..489 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:39 Download gff for
MXO02878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-b-RA | 315..801 | 1..489 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:39 Download gff for
MXO02878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9730529..9730640 | 1..113 | 95 | -> | Plus |
| 3L | 9730733..9731107 | 114..489 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:17 Download gff for
MXO02878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9723629..9723740 | 1..113 | 95 | -> | Plus |
| arm_3L | 9723833..9724207 | 114..489 | 98 | | Plus |
