MXO02884.5prime Sequence
754 bp (753 high quality bases) assembled on 2007-05-15
> MXO02884.5prime
CAGTCGACATGAAGCGGAAAACGACCGAGATCTGGTGCTTTTTCCGGGCG
GTGGACGACACGTTTGCGGTGTGTAATATCTGCAAGGCGAAGCTCTCTTA
CAAGACGACCACCACGAATCTAAGCAAGCACATGAACAGGATGCACCCCA
CATCGGGACTCAACCGGAACTCCAAGTACAAATTCCAGCCGCAGACCACC
ATCGCCATCGACCGGAACAAAGCCAAGCCGCGCAACTCAACGCAAGAGCT
GATATTGTTAGAATTCGTGAAGAAACATCCGCGTCTGCTTCAGAATCCGA
CGTGGGAAACACGGGGCAATCTGGAGTCGCTGTGGGAGGAACTGTCATCC
GAACTTAATAGCCACGGTCCGCCGCGAAAAGATATAGCCACCTGGAGAAG
GGCCTTAAAGGACTGGAAGAGGTTTATCCTGAGAAAGGTGGAAAAGAATG
AGATGCAGAACATGCCTTTTGGCACCAGTCTTACTTCGTCGGAGGAAACA
ATAGCCACACTGTGTAGATTAAACGAGGATGTAAGTCAGATTATTATGAA
GGTCTCCGACGATGAAATGCATGAGAATTCCACCACGGAATTTGATGTGG
ACGAAGTAGAGGATGTGGTCCCGGAAGAAGATGGTGGCGCCCTTCAGACT
TCCGCCGAGTACGTTTACGAACCGGAGGAGAACAAAACGGACATTGACCC
GCTTTACCTGCAATCTAACAAACGGGCCGCATTGGCCAGCAGTCGACTGG
CGGA
MXO02884.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:14:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3995-PA | 969 | CG3995-RA | 1..746 | 9..754 | 3705 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3995-RA | 1185 | CG3995-RA | 68..820 | 2..754 | 3735 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17042669..17043069 | 402..2 | 1975 | 99.5 | Minus |
| 3R | 32079331 | 3R | 17042261..17042614 | 754..401 | 1770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:09:37 has no hits.
MXO02884.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:14:04 Download gff for
MXO02884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3995-PA | 1..745 | 9..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:11 Download gff for
MXO02884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3995-RA | 67..819 | 1..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:32 Download gff for
MXO02884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3995-RA | 67..819 | 1..753 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:32 Download gff for
MXO02884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17042262..17042613 | 402..753 | 100 | <- | Minus |
| 3R | 17042670..17043069 | 1..401 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:11 Download gff for
MXO02884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12867984..12868335 | 402..753 | 100 | <- | Minus |
| arm_3R | 12868392..12868791 | 1..401 | 99 | | Minus |
