Clone MXO02886 Report

Search the DGRC for MXO02886

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:28
Well:86
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG7810-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02886.5prime Sequence

874 bp (805 high quality bases) assembled on 2007-04-17

> MXO02886.5prime
CAGTCGACATGACAACTGGAAGCGATGCTGACGGGGATGGTGACCACCAG
GGCAACAATGACATCGTCCCAAATCCAGAACATCCTCCGGAGATAATAGA
CATCTTCAAATCCTTGGCCGAAAACAATCAAATCGTCTTTAAGTCGCAGC
AAATTGATGATCCGGAAATTCCGGTCGAAGAGAAGCAACAAATAGCACGA
GATGCCTTCGATAAGAACCGTGAGAACTTTCTCATCCGATTTGGAGGCTT
CCTGAATGTAAGACAACTGGGTTCCTTCCAGGAACTGGCTGTCAAGGAAC
CCATTAAAGCAGATGAAAATCTGGAGGAGATGTGCCTGCTGCTAGAGGAT
TTTAGGAGGAAACTCAACACTCGTGCGGTATCCATTAAAAACCGAAGATA
CCATGCCATGCAGCAGCTCCTTGACAAGGGAGAATACTTTAGCGAACACG
AGATGATGCAAAGGGCGCCGGATCTCTACCAGGAGCTAGTGGGTCAGTAC
CTAACGGAGGCGGAAAAGAAGGCTCGGGATAGTTACGATGTTCGGAATAC
TAGCTTCTCAGGAATACTAATGCATACGTTGGAGAAAAAGCAAAGAGATG
AATTACTAGAGGAAACGCAGCAGGAAGGAAAGCAGAGCGTGCAGGTCACA
AGTGAATCCAATCCTCAGGCAGACTGTGACGTTCCTGTCGCTTGCCGAAA
GCAGTGGGGTGGATTTGAAGATGATGAACCAGTGGCCTGTTCAACGAGTC
GAAATGCGGAAGTCCGAGCTCCAATGAATACAACTATGATCTCCACACCG
GAGTTCTATAATCCTGGAGAGCGAGAACTACTACGCAATGAGTTCTTGAG
TATGATGAAGGAACGCTTTCTTAG

MXO02886.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG7810-PA 1095 CG7810-RA 1..866 9..874 4330 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7810-RA 1320 CG7810-RA 73..938 9..874 4330 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8310258..8311123 874..9 4330 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:09:10 has no hits.

MXO02886.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:45 Download gff for MXO02886.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-PA 1..866 9..874 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:55 Download gff for MXO02886.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 73..938 9..874 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:56 Download gff for MXO02886.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7810-RA 73..938 9..874 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:56 Download gff for MXO02886.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8310258..8311123 9..874 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:55 Download gff for MXO02886.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8310258..8311123 9..874 100   Minus