MXO02888.5prime Sequence
852 bp (786 high quality bases) assembled on 2007-05-15
> MXO02888.5prime
CAGTCGACATGAACCACTGGCTAAGTATCATTCTTCTTGGGGTGTGGATA
TCCGCTCCTGAAGGTCTGGGTAACACGATCAAGGATCGCAATCTCTTCGC
CACCGAACTCTTCCAAACCCTCGCCACAGATCGCCAGGATGAGAACGTGA
TCATCTCGCCGGTTTCCATCCAGCTGGCCCTCGGGTTGGCTTACTACGGA
GCTGAGGGCAGGACGGCCGCGGAACTGCAGAAGACCTTGCACGCCTCCGC
CAAGGAGAGCAAAGATGGTCTGGCCGAGAGCTACCACAACCTGCTGCACT
CTTACATCAAGTCCAAGACCGTGTTGGAGATCGCCAACAAGGTGTACACC
CGGCAGAATCTCACGGTATCTAGCCACTTCCGAGAGGTGGCCCAGAAGTA
CTTCGACTCCGAGGTAGAACCACTGGACTTCAGTCGCGAAACGGAGGCCG
TGGAGCAGATCAACCGCTGGGTGAAGCAGCAGACGGAGAACAAGATCGAA
CGGGTGGTGGAAAGCCTGGAGCCGGACACCAATGTGGCGCTGGTCAACGC
CATCTACTTCAAGGCTCGCTGGGCACGACCCTTCAACGACGAGGATACCC
GGGATCGCGAGTTCTGGCTGAGCGAGAGCCGGTCCATCCAGGTGCCAACC
ATGTTCGCAGACAACTGGTACTACTACGCCGACTACCCGGAACTCGACGC
CAAGGCCATTGAGCTGTTCTTCGAAAACATCAACCTGACCATGTGGTTCA
TCCTGCCCAACCAGCGTTCCGGACTACAGGCTCTGGAGCAGAAGCTCAAG
GGCGTCGACTTCAATCTGCTCGAAGACCGCTGGCAGTGGCAGAGTGTGTC
CG
MXO02888.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12172-PA | 1173 | Spn43Aa-RA | 1..844 | 9..852 | 4220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn43Aa-RA | 1294 | CG12172-RA | 37..880 | 9..852 | 4220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7147811..7148635 | 28..852 | 4125 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:22:28 has no hits.
MXO02888.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:14:08 Download gff for
MXO02888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12172-PA | 1..844 | 9..852 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:20:40 Download gff for
MXO02888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn43Aa-RA | 29..880 | 1..852 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:45 Download gff for
MXO02888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn43Aa-RA | 29..880 | 1..852 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:09:45 Download gff for
MXO02888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7147811..7148635 | 28..852 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:20:40 Download gff for
MXO02888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3035316..3036140 | 28..852 | 100 | | Plus |
