MXO02889.5prime Sequence
657 bp (657 high quality bases) assembled on 2007-05-15
> MXO02889.5prime
CAGTCGACATGTTTCGAGTGCATTGCAACAAGTGTTTCCGTCATCGCAAA
ACTGATCCAGCCGTGCCCTTCCACTTGACCCAGTGCCGGCACGTGATCTG
CGGCCCCTGTTTGGGCCAATCCTCGCTAGAAAAGAACTGCCCGCTATGCG
GCCAGGTGCTCAAAGCGATCCAGATCAACCGGGATATGCCAACTAGCGTG
GCCAACTACTTCGCGGATCCCCTGCGATTCCAGCAGATCTACCGCAAGAT
CTCCAAGTTCCAAGCGGACCAGCGAGCATCGGACAACCTGGGTTTCTACC
GTCAGTTGCAGCAGCTGGAGCAAAACAAGCGCCAGCTGGAGGGCTTTTGC
AAGATGGAGGCGCAGCTGAACCAGAATGTCTTGGACGAAAAGAAGCGAAT
CGCTGAATTGCGCACCTACATCGCTTACCACGAGAATGCGCAGAGGATGA
CGAGGCGCCGGCACAGTGCAGGTGAGAGATTCCATACGCCGGAGTTCAAG
GAGGCCTGGAACACCTCTATCAGCACTTCGGACAAATCGCCGTCGGATAT
GCCTTCTGATAGCTCCCGCCGGTCCGCGGACTTGGATACCCAGTCAACGC
GGAGAAGATCTTTTGGCAGCGACACTAAAGGCTTTCGTCTTGCAAGCTTT
CTAGACC
MXO02889.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:14:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12200-PA | 636 | CG12200-RA | 1..633 | 9..641 | 3090 | 99.5 | Plus |
| CG31053-PA | 660 | CG31053-RA | 217..290 | 225..298 | 195 | 90.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12200-RA | 993 | CG12200-RA | 105..737 | 9..641 | 3120 | 99.5 | Plus |
| CG31053-RA | 818 | CG31053-RA | 19..384 | 9..374 | 510 | 76.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19475167..19475799 | 9..641 | 3120 | 99.5 | Plus |
| 3R | 32079331 | 3R | 27927791..27928156 | 374..9 | 510 | 76 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:34:44 has no hits.
MXO02889.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:14:17 Download gff for
MXO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12200-PA | 1..636 | 9..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:29:20 Download gff for
MXO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12200-RA | 97..737 | 1..641 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:43 Download gff for
MXO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12200-RA | 97..737 | 1..641 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:43 Download gff for
MXO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19475159..19475799 | 1..641 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:20 Download gff for
MXO02889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19369192..19369832 | 1..641 | 98 | | Plus |
