MXO02890.5prime Sequence
534 bp (534 high quality bases) assembled on 2007-05-15
> MXO02890.5prime
CAGTCGACATGCGCGGCGCCCTAATGGATTACTATCTAAAAATACTCTTG
GTTATTTGCGCTGCCCACGAATTGGCCGGCGGAACGATCAAGTCTACCAG
AGATGCTGTTTACAAAAAATATCTGTCCCTAAGATCTTTGCCCTTCGAGG
ATTGCGGTTCTTTGTACCAGGTCAGCTACCTGGACATCGAGAGCTGTACG
ACACTGCCCTGCTCCATGGCCCGGAACGCGACAATTAAGGTTACTGTGCG
CTTCGATGATAATGGCAATGGCGTCAGCTTTCTGAAGCACGAAGTCCGAT
GGGTGTTTAACTACATCAAGACCCAGGCGGCCATAACTCCCGATCCCTGC
GACGGAGATCACGGATGCATAGAGATTGTTAGTGGCGGAAAGGCCTATTG
GGCCAATATCTTTGTGAACGAAACTTTGCCGGTGATGAAAGGTAGCATGT
TGTGGGAATCCAAGGATGCGAACGATCAGAACCTAATCTGTTTCCAGGTT
CCCGTTGTAATCACAGTGGCAAGCTTTCTAGACC
MXO02890.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:14:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6164-PA | 513 | CG6164-RA | 1..367 | 9..375 | 1835 | 100 | Plus |
CG6164-PA | 513 | CG6164-RA | 373..510 | 381..518 | 665 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Npc2f-RA | 712 | CG6164-RA | 158..668 | 8..518 | 2480 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24140526..24140696 | 264..434 | 780 | 97.1 | Plus |
3R | 32079331 | 3R | 24138052..24138202 | 8..158 | 755 | 100 | Plus |
3R | 32079331 | 3R | 24139778..24139887 | 156..265 | 550 | 100 | Plus |
3R | 32079331 | 3R | 24140808..24140892 | 434..518 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:11:27 has no hits.
MXO02890.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:14:27 Download gff for
MXO02890.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6164-PA | 1..513 | 9..522 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:58:27 Download gff for
MXO02890.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Npc2f-RA | 158..671 | 8..522 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:41 Download gff for
MXO02890.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Npc2f-RA | 158..671 | 8..522 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:41 Download gff for
MXO02890.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24140809..24140897 | 435..523 | 96 | -> | Plus |
3R | 24138052..24138200 | 8..156 | 100 | -> | Plus |
3R | 24139779..24139886 | 157..264 | 100 | -> | Plus |
3R | 24140527..24140696 | 265..434 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:58:27 Download gff for
MXO02890.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19963774..19963922 | 8..156 | 100 | -> | Plus |
arm_3R | 19965501..19965608 | 157..264 | 100 | -> | Plus |
arm_3R | 19966249..19966418 | 265..434 | 97 | -> | Plus |
arm_3R | 19966531..19966619 | 435..523 | 96 | -> | Plus |