MXO02892.5prime Sequence
833 bp (774 high quality bases) assembled on 2007-04-17
> MXO02892.5prime
CAGTCGACATGAATGGACCAAGCCTCCTCGTAAAGTTGACCACACGTGCC
TTCCTGTTATTCAACGGTCGCCCCCAGAATCGCTGGCTAAAGTCGATGGC
CAATAGTATGGTTTGCTCGCGAGGCGTCTCTCCAGAATTGATTGCCCAGC
TGGGAAAACCACCTAGGATGCGCACAAACCCGGCATTCCGGAAGGTGGCA
ACTCCTGAGTTCAAAAGCATATTTACCCCCGAGCTGAATGACCTTGTGGC
GCTCTTTAAGAAGTACGACTACGAGCTGCGGATCGCCGGCGGAGCTGTGC
GCGACATTCTGATGGGCATTCCACCGAAGGACATCGACTTGGCCACCACC
GCCACTCCGGATCAGATGAAGCAGATGTTTGAGAACGAGGAGGTGCGAAT
GATAAACGCAAACGGCGAAAAGCACGGCACCATCACTCCTAGAATCAATG
ACAAGGAGAACTTCGAGGTGACCACATTACGCATCGACATCCGCACCGAT
GGACGCCATGCGGAGGTGATGTACACGACTGACTGGCAACTGGATGCGAA
CCGCCGCGATTTGACAATCAACTCTATGTTCTTAGGCTTTGATGGCACCG
TGTACGATTACTTCTATGGCTACGATGATCTCCAGGAGCGTCGCGTGGTC
TTCGTGGGCGAAGCAGATATTCGCATTAAGGAGGATTTTCTGCGCATCCT
GCGCTATTTCCGATTCTACGGACGCATCGCAAGTGAGGAAAACAACCACG
ATAAGGCCACCCTGGCAGCCATAAAGGAAAACGCGAAAGGTCTTGCGAGA
ATAAGTGGCGAGCGGATCTGGTCTGAGCTCCAA
MXO02892.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:39:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2100-PA | 1434 | CG2100-RA | 1..825 | 9..833 | 4100 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2100-RB | 1597 | CG2100-RB | 98..924 | 7..833 | 4120 | 99.9 | Plus |
| CG2100-RA | 1586 | CG2100-RA | 98..924 | 7..833 | 4120 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5735432..5736258 | 833..7 | 4120 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:16 has no hits.
MXO02892.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:45 Download gff for
MXO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2100-PA | 1..823 | 9..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:56 Download gff for
MXO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2100-RA | 92..922 | 1..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:58 Download gff for
MXO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2100-RA | 92..922 | 1..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:58 Download gff for
MXO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5735434..5736261 | 1..831 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:56 Download gff for
MXO02892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1561156..1561983 | 1..831 | 99 | | Minus |
