MXO02893.5prime Sequence
802 bp (801 high quality bases) assembled on 2007-04-17
> MXO02893.5prime
CAGTCGACATGAACAGCGACGGCGAAGCCTCATCACTGCAGATGCCCCAG
GTGACGGTGGGTGGCATGCTGCCGGTAGAAGCCAACCAATCGCCTGAAAC
CGCTCCGCTTTCGATGGCGGAGACGGTGTCCAACACGGACTTCTACATCG
GCGTTGGCCTGGCTATCTCCTCCTGCTTCTTCATCGGTTCCAGCTTCATC
ATCAAAAAGAAGGCACTCATTCGGCTGAGCAGGTACGGCGAGGTGCGGGC
GTCAGCTGGAGGATTTGGATATCTGAGGGAGTGGATCTGGTGGGCGGGCC
TTCTGACAATGGGTGTGGGAGAAGCGGCCAACTTTGCGGCCTACGCCTTT
GCCCCCGCTTCATTGGTCACTCCGTTTTGTGCGCTGACTGTTATCATCTC
AGCCGTGATGGCCTCCAGATTCCTCAACGAGAAGCTAAACTTGCTGGGGA
AGATCGGCTGCTTTCTGTGCATACTGGGATCCACCATCATTGTGATTCAC
TCGCCCAAAGAGAAGGAGATCGAGGATTTGCAGCTGCTATTCGATATGCT
TTTGGATCCGGTTTTCATTCTATACGTGATCTGCATCGTCGGTTCCACGG
TGTTTGTGGCCTGCTTCATTGCACCACGGCATGGGCACACCAATGTGGTA
GTTTATATCTTCTTGTGCTCCGGCATCGGATCTCTGACTGTGATGTCCTG
CAAGGCATTGGGCCTAGCCATACGGCAGACGCTGAATAACGGAGGCAACG
TCTTCCTCACATGGATGCCATGGTTCCTGATCCTGGTCACCGTCACTTTC
AT
MXO02893.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:39:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12292-PA | 1158 | CG12292-RA | 373..794 | 381..802 | 2060 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:55:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spict-RB | 1461 | CG12292-RB | 68..861 | 9..802 | 3850 | 99 | Plus |
| spict-RA | 1461 | CG12292-RA | 68..861 | 9..802 | 3850 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:54:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12705582..12706083 | 301..802 | 2405 | 98.6 | Plus |
| 2L | 23513712 | 2L | 12704792..12705092 | 9..309 | 1460 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:55:00 has no hits.
MXO02893.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:23:46 Download gff for
MXO02893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12292-PA | 1..794 | 9..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:30 Download gff for
MXO02893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spict-RA | 63..861 | 1..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:59 Download gff for
MXO02893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spict-RA | 63..861 | 1..802 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:59 Download gff for
MXO02893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12704787..12705092 | 1..309 | 97 | -> | Plus |
| 2L | 12705591..12706083 | 310..802 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:30 Download gff for
MXO02893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12704787..12705092 | 1..309 | 97 | -> | Plus |
| arm_2L | 12705591..12706083 | 310..802 | 98 | | Plus |
