MXO02901.5prime Sequence
701 bp (661 high quality bases) assembled on 2007-05-15
> MXO02901.5prime
CAGTCGACATGATGTCTGCCTTGTGCCCCGAGGCAATGAATGATGCGGAT
CGTCTGGTGGAAAATCTGCGCCATGTGCCGGTCCGCCTGCCCAGGGAGTT
GGAGGTTCGCCAGCTGTGCCGCTCGTTGAGTGACTTGCTCGTCGGCGAGT
CGAATCTACTGAGCCTGCAGAGTCCGCAGATCGTATGCGGTGACATTCAC
GGTCAGTTCGAGGATCTGCTCCACCTGCTGGAATTGGGCGGTTCGGTGCA
GGAGCATCGCTACTTGTTCCTGGGTGACCTGGTGGATCGGGGCAAGAACA
GCGTGGAGACCTTTCTTCTGCTAGCTGCTCTCAAGGTGCGACATCCGGCA
CAAGTTAGCCTGCTACGGGGCAATCATGAGTGCCGCAGTGCCACTCGATC
CTATGGATTCTACGAGGAGTGCCTTTCGCGGTACGGCTCTGCGAATGTCT
GGAGGATGTGCTGCCGTGTCTTCGATCTCTTGCCGCTGGCGGCTATCATT
GATGGCAATATATTGTGTGTTCATGGCGGCCTGTCGCCGGATATGCAACG
ATTGGATGACTTACGTAGCCTGGATCGCTGCCACAAGATACCCGAAAGTG
GAATTATAGCTGATCTTCTCTGGAGCGATCCACAGGAAGCGCCTGGATGG
GCGGCATCGCCACGAGGACATGGAAAACTCTTCGGTGGCGATGTTGCTGA
T
MXO02901.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:04:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11597-PA | 954 | CG11597-RA | 1..688 | 9..696 | 3415 | 99.8 | Plus |
| CG11597-PB | 954 | CG11597-RB | 1..688 | 9..696 | 3415 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11597-RC | 1806 | CG11597-RC | 712..1403 | 9..700 | 3430 | 99.7 | Plus |
| CG11597-RB | 1686 | CG11597-RB | 592..1283 | 9..700 | 3430 | 99.7 | Plus |
| CG11597-RA | 1449 | CG11597-RA | 355..1046 | 9..700 | 3430 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11820741..11821432 | 700..9 | 3430 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:34:02 has no hits.
MXO02901.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:04:49 Download gff for
MXO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11597-PB | 1..692 | 9..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:28:52 Download gff for
MXO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11597-RA | 329..1028 | 1..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:19 Download gff for
MXO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11597-RA | 347..1046 | 1..701 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:19 Download gff for
MXO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11820740..11821438 | 1..701 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:28:52 Download gff for
MXO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11813840..11814538 | 1..701 | 99 | | Minus |
