MXO02907.5prime Sequence
741 bp (728 high quality bases) assembled on 2007-05-15
> MXO02907.5prime
CAGTCGACATGGTCGGAATAACGCCCGCAGAGAAGAAAGCGCTGATAACG
CGCAATCTGCAGGAGACGCTCGGCGATGACAAGCTGACCAAGATCCTGGC
GGAGCGCGATCTAAAGATCTACTGGGGAACGGCGACGACGGGCAAGCCAC
ATGTCGCCTATTTCGTGCCCATGTCGAAGATTGCCGATTTCCTGAAGGCA
GGATGCGAAGTGACCATCCTGTTCGCCGATCTCCACGCCTATCTGGACAA
CATGAAGGCACCGTGGTCTCTCCTGGAGCTGCGAACCAAGTACTACGAAC
AGGTCATCAAGGCCATGTTGAGCTCCATCGGCGTTCCGCTGGAGAAACTG
AAGTTCGTCAAGGGCAGCGACTATCAGCTGTCCAAGGAGTACACCCTGGA
TGTATACAAGCTCAGCTCCGTGGTCACGCAACACGATGCCAAGAAGGCGG
GCGCAGAGGTGGTCAAACAGGTGGAGTACCCACTGCTCTCCGGTTTGCTT
TATCCTGGTCTGCAGGCTCTGGACGAGGAGTACCTCAAGGTGGACGCACA
ATTCGGTGGCGTGGATCAGCGCAAGATCTTTACCTTCTCAGAGAAGTATC
TGCCGCAGTTGGGCTACGAAAAGCGCATTCACTTCATGAATCCCATGGTT
CCCGGCTTGGCTGGTGGCAAGATGTCCTCTTCCGAGGAGGACTCAAAGAT
CGATCTTCTGGACTCCCCGGCCAACGTGAAGAAGAAGCTGA
MXO02907.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4561-PA | 1578 | Aats-tyr-RA | 1..733 | 9..741 | 3665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-tyr-RA | 1771 | CG4561-RA | 60..792 | 9..741 | 3665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16418604..16419243 | 648..9 | 3200 | 100 | Minus |
| 3L | 28110227 | 3L | 16418449..16418542 | 741..648 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:51 has no hits.
MXO02907.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-15 16:04:53 Download gff for
MXO02907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4561-PA | 1..732 | 9..740 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:39 Download gff for
MXO02907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-tyr-RA | 60..791 | 9..740 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:15 Download gff for
MXO02907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-tyr-RA | 60..791 | 9..740 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:15 Download gff for
MXO02907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16418450..16418541 | 649..740 | 100 | <- | Minus |
| 3L | 16418604..16419243 | 9..648 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:39 Download gff for
MXO02907.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16411550..16411641 | 649..740 | 100 | <- | Minus |
| arm_3L | 16411704..16412343 | 9..648 | 100 | | Minus |
